Detailed information    

insolico Bioinformatically predicted

Overview

Name   hns   Type   Regulator
Locus tag   MTO68_RS01155 Genome accession   NZ_CP094620
Coordinates   250434..250760 (+) Length   108 a.a.
NCBI ID   WP_004718506.1    Uniprot ID   A0A077KSH9
Organism   Acinetobacter sp. NyZ410     
Function   repress the expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 245434..255760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MTO68_RS01130 (MTO68_01130) hemC 246017..246940 (+) 924 WP_244015944.1 hydroxymethylbilane synthase -
  MTO68_RS01135 (MTO68_01135) - 246954..247736 (+) 783 WP_244014685.1 uroporphyrinogen-III synthase -
  MTO68_RS01140 (MTO68_01140) - 247733..248563 (+) 831 WP_244014686.1 hypothetical protein -
  MTO68_RS01145 (MTO68_01145) - 248568..249761 (+) 1194 WP_244014687.1 tetratricopeptide repeat protein -
  MTO68_RS01150 (MTO68_01150) - 249771..250208 (+) 438 WP_034617650.1 acyl-CoA thioesterase -
  MTO68_RS01155 (MTO68_01155) hns 250434..250760 (+) 327 WP_004718506.1 H-NS histone family protein Regulator
  MTO68_RS01160 (MTO68_01160) gspN 250924..251667 (+) 744 WP_004818496.1 type II secretion system protein N -
  MTO68_RS01165 (MTO68_01165) - 251667..252512 (+) 846 WP_004818497.1 type II secretion system protein N -
  MTO68_RS01170 (MTO68_01170) gspD 252554..254803 (+) 2250 WP_244014688.1 type II secretion system secretin GspD -
  MTO68_RS01175 (MTO68_01175) - 254988..255710 (+) 723 WP_004818502.1 FHA domain-containing protein -

Sequence

Protein


Download         Length: 108 a.a.        Molecular weight: 12384.15 Da        Isoelectric Point: 8.4038

>NTDB_id=670213 MTO68_RS01155 WP_004718506.1 250434..250760(+) (hns) [Acinetobacter sp. NyZ410]
MMPDISNLSVEELRKLTAEAEALIESKKDQAVEDAYNKIIEIAQSAGLTLEQFIEYGAQKRKKTTRKAVEPRYRNKKDTS
ETWTGRGKQPRWLVAEIEKGAKLEDFLI

Nucleotide


Download         Length: 327 bp        

>NTDB_id=670213 MTO68_RS01155 WP_004718506.1 250434..250760(+) (hns) [Acinetobacter sp. NyZ410]
ATGATGCCTGATATTAGTAATTTATCGGTTGAAGAGTTAAGAAAGTTAACAGCTGAAGCAGAAGCTTTAATTGAAAGTAA
AAAAGACCAAGCAGTTGAAGATGCCTATAATAAAATTATTGAAATTGCGCAATCTGCTGGTTTAACTTTAGAACAGTTTA
TTGAATACGGCGCGCAAAAGCGTAAAAAGACAACGCGTAAAGCTGTTGAGCCGCGTTACCGCAATAAAAAAGATACTTCT
GAAACTTGGACTGGACGCGGTAAACAACCACGTTGGTTGGTTGCAGAAATCGAAAAAGGTGCAAAATTAGAAGATTTCTT
GATCTAA

Domains

Predicted by InterproScan.

H-NS histone family (Histone_HNS)

(12-102)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A077KSH9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hns Acinetobacter baumannii strain A118

78.704

100

0.787