Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | H7R41_RS03040 | Genome accession | NZ_AP022238 |
| Coordinates | 633947..634462 (-) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain WP8-W18-ESBL-11 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 628947..639462
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H7R41_RS03015 (WP8W18E11_05750) | - | 629494..631137 (+) | 1644 | WP_000281764.1 | nitrite/sulfite reductase | - |
| H7R41_RS03020 (WP8W18E11_05760) | - | 631130..631615 (+) | 486 | WP_000935247.1 | DUF934 domain-containing protein | - |
| H7R41_RS03025 (WP8W18E11_05770) | - | 631697..632050 (+) | 354 | WP_000457779.1 | multidrug efflux SMR transporter | - |
| H7R41_RS03030 (WP8W18E11_05780) | - | 632093..632536 (-) | 444 | WP_001176580.1 | VOC family protein | - |
| H7R41_RS03035 (WP8W18E11_05790) | - | 632663..633838 (-) | 1176 | WP_000129968.1 | thiolase family protein | - |
| H7R41_RS03040 (WP8W18E11_05800) | fimT | 633947..634462 (-) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| H7R41_RS03045 (WP8W18E11_05810) | omp38 | 634843..635871 (+) | 1029 | WP_000777889.1 | outer membrane protein Omp38 | - |
| H7R41_RS03050 (WP8W18E11_05820) | - | 635996..636139 (-) | 144 | WP_162138624.1 | hypothetical protein | - |
| H7R41_RS03055 (WP8W18E11_05830) | - | 636158..637363 (-) | 1206 | WP_009519721.1 | RtcB family protein | - |
| H7R41_RS03060 (WP8W18E11_05840) | - | 637640..639100 (-) | 1461 | WP_000004971.1 | amino acid permease | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=67018 H7R41_RS03040 WP_000477151.1 633947..634462(-) (fimT) [Acinetobacter baumannii strain WP8-W18-ESBL-11]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=67018 H7R41_RS03040 WP_000477151.1 633947..634462(-) (fimT) [Acinetobacter baumannii strain WP8-W18-ESBL-11]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAGCATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAC
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |