Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   MST18_RS03935 Genome accession   NZ_CP094555
Coordinates   808020..812534 (+) Length   1504 a.a.
NCBI ID   WP_180133515.1    Uniprot ID   -
Organism   Acinetobacter sp. YH12068_T     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 803020..817534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MST18_RS03910 (MST18_03910) - 803476..804069 (-) 594 WP_233945418.1 hypothetical protein -
  MST18_RS03915 (MST18_03915) pilG 804413..804796 (+) 384 WP_078191060.1 twitching motility response regulator PilG Regulator
  MST18_RS03920 (MST18_03920) - 804826..805194 (+) 369 WP_180083624.1 response regulator -
  MST18_RS03925 (MST18_03925) - 805201..805737 (+) 537 WP_180101812.1 chemotaxis protein CheW -
  MST18_RS03930 (MST18_03930) - 805782..807857 (+) 2076 WP_078192256.1 methyl-accepting chemotaxis protein -
  MST18_RS03935 (MST18_03935) chpA 808020..812534 (+) 4515 WP_180133515.1 Hpt domain-containing protein Regulator
  MST18_RS03940 (MST18_03940) - 812538..813005 (+) 468 WP_180133514.1 hypothetical protein -
  MST18_RS03945 (MST18_03945) dapE 813075..814208 (-) 1134 WP_180023170.1 succinyl-diaminopimelate desuccinylase -
  MST18_RS03950 (MST18_03950) - 814331..814480 (-) 150 WP_078191053.1 entericidin A/B family lipoprotein -
  MST18_RS03955 (MST18_03955) - 814635..815498 (-) 864 WP_180133513.1 DUF1853 family protein -
  MST18_RS03960 (MST18_03960) - 815587..816021 (+) 435 WP_180101808.1 YbaN family protein -
  MST18_RS03965 (MST18_03965) elsL 816014..816508 (+) 495 WP_180101807.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1504 a.a.        Molecular weight: 167773.77 Da        Isoelectric Point: 4.3584

>NTDB_id=670170 MST18_RS03935 WP_180133515.1 808020..812534(+) (chpA) [Acinetobacter sp. YH12068_T]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFEELAGLFTTWLENPQDKDTLTTIRRHFHTLKGSGRMVGAKSA
GETAWAVEDTLNRVIAGSVQLTPTVQKFAQTVLNVYQYKLYPRFKNVAELDVDLRPLVLMGQQLQQNISLEPALEELLKL
ADQLKSEDGVTGLELTDVEATAPVEVLENTIDAVVESEPAPEQVDADASLVEETVSIFIEEAEEHLQTIDQFLQSDDSKS
QDYNGLIRALHTLRGSSSMAQIEEIFEASSKVENLFKTLLQDEIVSSSKETALLIQYAEFVRDYLHLLRSGDKANLASIY
ETFKAAWDDYGFASQDQLAPEDNPQGLVSKLIELNIDQLLDAEFEFDKRALAEFPDYIQQLSQQALELIEHTDNRASVGI
HDFTTQLRAAYQSLVEKPKLLHADYGYELFAQAHQEFIHLFDTLAAGQRVVLSEEVQRFLNELTAFVQQDIEAVAATTTP
EAHVVAEPVATVEDKAAVANTTAVDFAQLSQRIQLDHQQMQAADANNDFDEDLLGIFIEEAEELLVGIDQDLSTWTHDQT
NTSALNNLMRYLHTLKGGANMIAASHVGLISHELESIYERIIRQQISITPALIQIIRLVQDDISDRIQTIRDQGIDYPAN
NVIDILRNIQSIVAGERSEPVALASAPISAETLQATVEPDVSVSEPMDAAEDTAEAVVEAQTTAHTESAVEHLEHAVAEH
VEHPDDDLRSVMEETFLEESEEILEQAVQLLNQWTEQRSDRNVLLQLQRAAHSIKGGARMVENEPVAAIAYQLETTFEHF
AVHHFNSNAYDGLLKTTLAWLKEAIFNHDYSNFDSIKLSLESIQYVDVTVQLPNRVAELEQGIVSKGFEFIQGDGVEPPS
MLGEWTEANSSDNSNEMIRISADLVEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMDGELESQIIA
KHGSENSRYSDFDPLEMDQYSSINQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQSEIQESLMRTRLVPFDRL
LPRLQRIVRQTSSTLNRPAELIVQNTEGELDRTILERLVTPFEHMLRNAVDHGLEDTADRLALKKPEVGSIVLNISRQGT
DVLVSFSDDGKGIDETKIKDKALKLGLIKADQFLDKQEILQLIFHPGFSTAQAVTQISGRGVGLDVVQSEIKALGGHVSV
ESELGKGTTFTIRVPTTVAVSDALMVKAGDQQYAISLAQIERIVRIAPTALETYFNSKDDVFKIDNTNYKLRYLSEFVGN
QPIPRLNNVGHSLPVLLIKGNSGQTIALLVDQLVGSRSQIVVKPIGQQFTSVAAIAGATILGDGHVCLILDGQNIARQIQ
TTQRVKHSAEQRDLGRQANARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDG
FEVTNLVRHHDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIEALIAEKQG

Nucleotide


Download         Length: 4515 bp        

>NTDB_id=670170 MST18_RS03935 WP_180133515.1 808020..812534(+) (chpA) [Acinetobacter sp. YH12068_T]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACAACTACGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTTT
AGAGATTTTTGTTGAAGAAATAGAAGAAATCTTTGAAGAACTGGCGGGTTTATTTACAACTTGGTTGGAAAATCCACAAG
ATAAAGACACTTTAACGACGATTCGTCGTCATTTCCATACTCTGAAAGGTTCAGGTCGTATGGTCGGGGCAAAATCGGCG
GGTGAAACTGCATGGGCAGTTGAAGATACACTGAATCGTGTCATTGCGGGTTCAGTACAGTTAACGCCGACAGTTCAAAA
GTTTGCACAAACAGTTTTAAATGTTTATCAATATAAGCTCTATCCACGGTTTAAAAATGTTGCCGAATTGGATGTAGACT
TACGACCATTGGTTTTAATGGGGCAACAATTACAACAAAATATCAGCCTTGAGCCTGCACTCGAAGAATTATTAAAACTG
GCAGATCAATTAAAATCTGAAGATGGTGTCACTGGTTTAGAACTGACTGATGTTGAAGCTACAGCACCTGTAGAAGTGCT
TGAAAACACGATTGATGCGGTTGTTGAATCAGAACCTGCTCCTGAACAAGTGGATGCAGATGCATCACTAGTCGAAGAGA
CAGTGAGCATTTTTATTGAAGAAGCTGAAGAACATCTACAAACGATTGATCAGTTCCTTCAATCTGATGACAGTAAATCA
CAAGATTATAATGGTTTGATTCGCGCGCTACACACCTTGCGTGGTAGTTCGTCGATGGCGCAAATCGAAGAGATTTTTGA
AGCCAGTTCAAAAGTTGAAAATTTATTCAAAACCTTATTGCAAGACGAAATCGTATCGAGCTCGAAAGAAACTGCTTTAT
TGATTCAATATGCTGAATTTGTTCGTGATTATTTACACTTGCTGCGTTCAGGAGATAAGGCAAATCTTGCATCTATTTAT
GAAACCTTCAAAGCTGCTTGGGATGATTATGGTTTTGCTAGCCAAGATCAATTGGCGCCTGAAGATAATCCACAAGGTTT
GGTTTCTAAACTAATCGAATTAAATATTGATCAGTTATTGGATGCTGAATTTGAGTTTGATAAACGTGCCCTTGCTGAAT
TCCCAGACTATATTCAACAGCTCAGTCAACAAGCTTTAGAGTTGATCGAACATACGGATAATCGTGCGTCTGTTGGAATC
CATGATTTCACAACTCAACTGCGTGCAGCGTATCAGTCTTTAGTTGAAAAGCCTAAATTACTCCATGCTGATTATGGCTA
TGAGTTATTTGCGCAAGCACATCAAGAGTTCATTCACTTATTTGACACTTTAGCTGCGGGTCAGCGTGTAGTGTTAAGTG
AAGAGGTTCAGCGTTTCTTAAATGAGCTGACTGCATTTGTACAACAAGACATTGAAGCAGTTGCAGCGACGACAACACCA
GAAGCCCATGTAGTTGCTGAACCTGTTGCCACAGTAGAAGATAAAGCCGCTGTTGCAAATACAACAGCAGTAGACTTTGC
TCAATTAAGTCAGCGTATTCAACTTGATCATCAACAGATGCAAGCGGCGGATGCGAATAATGACTTTGATGAAGATCTTT
TAGGGATCTTTATTGAAGAGGCTGAAGAATTATTGGTGGGGATTGACCAAGACCTTAGTACTTGGACGCACGATCAAACC
AATACTTCAGCTTTGAATAATTTAATGCGCTATTTGCATACCCTAAAAGGTGGTGCAAATATGATTGCCGCGTCTCATGT
GGGTTTAATTTCGCATGAATTGGAATCGATTTATGAGCGCATTATTCGTCAGCAAATTTCGATTACGCCTGCGTTAATTC
AAATTATTCGTTTAGTGCAAGATGATATTTCAGATCGTATTCAAACCATTCGTGACCAAGGGATCGACTACCCTGCGAAT
AATGTGATCGATATTCTAAGGAATATTCAGTCAATTGTGGCAGGAGAGCGTTCAGAACCTGTTGCATTGGCTTCGGCTCC
TATTTCAGCTGAAACTCTACAAGCTACAGTAGAGCCAGATGTGTCGGTGTCAGAGCCGATGGACGCTGCTGAAGACACTG
CAGAAGCAGTGGTTGAAGCTCAAACGACTGCTCACACTGAGTCCGCTGTTGAACATCTTGAACATGCGGTTGCTGAACAT
GTTGAGCATCCAGATGATGATCTACGTTCGGTCATGGAAGAAACCTTCCTTGAAGAGTCTGAGGAAATTCTTGAACAAGC
CGTTCAATTATTAAATCAATGGACTGAACAACGTAGTGACCGTAACGTATTGCTTCAATTACAACGTGCTGCCCACAGTA
TTAAGGGTGGTGCGCGTATGGTTGAAAATGAACCTGTTGCCGCAATTGCGTATCAACTTGAGACGACGTTTGAGCATTTT
GCGGTTCATCATTTCAACTCAAATGCATATGACGGCTTACTCAAAACGACGTTGGCATGGTTAAAAGAAGCAATCTTCAA
CCATGACTATAGTAATTTTGACAGCATCAAATTGAGCTTAGAATCCATTCAGTATGTGGATGTTACGGTTCAATTGCCAA
ACCGTGTTGCAGAATTAGAACAAGGTATTGTCAGTAAAGGCTTTGAATTTATTCAAGGTGATGGTGTTGAACCGCCATCG
ATGTTGGGTGAGTGGACTGAAGCCAATTCTTCTGATAACAGTAATGAGATGATTCGTATCTCGGCTGATCTCGTCGAGAA
GATGATTGACTTATCAGGCGAGAACTCGATTAACCGTTCACGTATTGAAATGGACTTAGGTCAGCTAGGCAATACCTTGA
ATGAAATGGAGTTAGCAATTAAGCGACTTGCTGACCAGTTACGTCGAATGGATGGTGAGCTTGAGTCACAAATTATTGCC
AAACATGGTTCTGAAAATTCACGCTATTCGGATTTTGACCCATTGGAGATGGACCAATATTCATCGATTAACCAATTGTC
AAAATCTCTAGCCGAATCTGCGTCGGATTTGGTTGACTTCAAGAGTACTTTGGCAGAAAAAATCCGTGATGCGGAAGGTC
TGTTATTACAACAATCACGTATTCAGTCAGAAATTCAAGAGAGTCTAATGCGTACCCGTTTGGTACCATTTGATCGTTTA
TTACCACGTTTACAACGTATTGTGCGTCAAACTTCTTCGACTTTGAACCGTCCTGCGGAATTGATTGTTCAAAATACTGA
AGGTGAATTAGACCGCACGATCTTAGAGCGTTTGGTGACACCATTTGAACATATGCTGCGTAATGCGGTCGACCATGGTT
TAGAAGATACTGCTGACCGTTTGGCTTTGAAAAAGCCAGAAGTAGGTAGCATCGTCTTGAACATTAGTCGTCAGGGTACT
GATGTACTGGTGTCTTTCAGTGATGATGGTAAAGGGATTGATGAAACCAAAATTAAAGACAAAGCCTTAAAACTTGGTTT
AATCAAAGCGGATCAGTTCCTCGATAAACAAGAAATCTTGCAATTGATCTTCCATCCAGGTTTCTCAACGGCACAAGCGG
TAACGCAAATTTCGGGTCGTGGTGTTGGTCTGGATGTGGTGCAAAGTGAAATTAAAGCTTTGGGGGGTCATGTTTCCGTT
GAGTCTGAGTTAGGTAAAGGGACGACCTTTACCATTCGTGTACCAACCACAGTAGCGGTCAGCGATGCCTTGATGGTGAA
AGCGGGCGATCAGCAATATGCGATTTCATTAGCGCAAATTGAACGTATTGTCCGTATTGCACCTACGGCACTCGAAACTT
ACTTCAATAGTAAGGATGACGTGTTTAAAATTGACAACACCAATTACAAACTACGTTATCTATCAGAGTTTGTGGGTAAT
CAGCCAATTCCACGTTTAAATAATGTCGGCCATTCATTGCCTGTACTACTAATTAAAGGCAACAGTGGTCAAACCATTGC
TTTATTGGTCGATCAGCTGGTGGGTTCACGTTCTCAAATCGTGGTGAAACCAATTGGTCAACAATTTACCAGTGTAGCCG
CGATTGCAGGTGCCACGATTCTAGGTGATGGTCATGTATGTTTGATTTTGGATGGGCAAAATATTGCACGTCAAATTCAA
ACTACGCAGCGTGTTAAACATTCAGCTGAACAGCGTGATTTGGGCCGTCAAGCCAATGCGCGTCGTTTAGTGATGATTGT
CGATGACTCGGTAACTGTACGTAAAGTGACTTCACGCTTACTTGAACGTCAAGGTTATGACATTGTGACAGCGAAAGATG
GTGTGGATGCAATTGAACAGCTTGAAAATGTCCGTCCAGACTTGATGCTACTCGATATTGAAATGCCACGTATGGATGGT
TTCGAAGTGACAAACTTAGTCCGTCACCATGACATTCACCGTGACTTGCCAATCATTATGATTACATCGCGTACTGGTGA
AAAACATCGTGAGCGTGCATTTAGCTTAGGTGTGACTCACTATATGGGTAAACCGTTCCAAGAAGCTGAATTGCTTGCCA
ATATTGAAGCGTTAATTGCAGAAAAGCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.642

100

0.616