Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   MST17_RS14445 Genome accession   NZ_CP094545
Coordinates   2963247..2965469 (+) Length   740 a.a.
NCBI ID   WP_180026796.1    Uniprot ID   -
Organism   Acinetobacter sp. YH16056_T     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2958247..2970469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MST17_RS14415 (MST17_14395) - 2959319..2959657 (-) 339 Protein_2784 tRNA-binding protein -
  MST17_RS14420 (MST17_14400) - 2959879..2960214 (-) 336 WP_078189783.1 hypothetical protein -
  MST17_RS14425 (MST17_14405) - 2960393..2960863 (-) 471 WP_257246855.1 transposase family protein -
  MST17_RS14430 (MST17_14410) - 2960811..2961206 (-) 396 WP_071851480.1 transposase family protein -
  MST17_RS14435 (MST17_14415) gspG 2961417..2961854 (-) 438 WP_180026797.1 type II secretion system major pseudopilin GspG -
  MST17_RS14440 (MST17_14420) gspF 2961891..2963096 (-) 1206 WP_078189785.1 type II secretion system inner membrane protein GspF -
  MST17_RS14445 (MST17_14425) priA 2963247..2965469 (+) 2223 WP_180026796.1 primosomal protein N' Machinery gene
  MST17_RS14450 (MST17_14430) - 2965548..2967389 (+) 1842 WP_180026795.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  MST17_RS14455 (MST17_14435) hslO 2967440..2968315 (+) 876 WP_078189788.1 Hsp33 family molecular chaperone HslO -
  MST17_RS14460 (MST17_14440) - 2968561..2969013 (+) 453 WP_180026794.1 DUF2147 domain-containing protein -
  MST17_RS14465 (MST17_14445) - 2969298..2969762 (+) 465 WP_168377964.1 DUF2147 domain-containing protein -
  MST17_RS14470 (MST17_14450) - 2969951..2970415 (+) 465 WP_078192815.1 DUF2147 domain-containing protein -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 83956.02 Da        Isoelectric Point: 8.7572

>NTDB_id=670149 MST17_RS14445 WP_180026796.1 2963247..2965469(+) (priA) [Acinetobacter sp. YH16056_T]
MANSASIATPIYRVRVAVPVYLYDCFDYSLNQEQYQQAEVGARVAVSFGRQNLTGIIVEKIAPDAPLDSSFKLKAITELL
DDRAILDEKVLNLLTWSAQYYQFPIGEVMQSALPTLLRQGKPYNLLARTWNLIDHNAEAKIKRSERQQEAYKILKLHPTG
TGENLLNLSGVETATLKALEKKGICQCVLAEQDFSPMPMSMAQMPLTANPEQKKAIDRVLKARNQYQAFLLDGLTGSGKT
EVYLQIMQEILKQGKQVLVLVPEIGLTPQTISRFQSRFHCNIALLHSGLNDSKRMQAWQAAQTGKASIILGTRSAIYTPL
PNLGLIVIDEEHDLSFKQQEGFRYYARDVALYRGHLEQCPVILGSATPSIECYALAKQGKMTVLELNQRAGTAVMPKMHI
LDLKVAQKQHGISQLLIGEIRKRLEKKEQVLVFLNRRGYAPVLICESCAWQAKCPHCDANFTVHRTPYQHLHCHHCGTIH
RMPEHCPQCNHQELKSVGMGTAKVEESLNELFPQHDVIRVDRDSTSRVGSWQKIYDKIQKSEPAILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRAIERTAQLIVQVTGRAGRGERKGDVFLQTLRPDHPLLNILVNEDYRKFAKETMKEREMAQM
PPFRYAALVRCESKNQELNTEFLQQHAQLLRQDSAGIIDIWGPIPAPMERKAGRYQSHMVLLSTDRARLHYYLRYWWQNI
LHNKPSNMKLSLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=670149 MST17_RS14445 WP_180026796.1 2963247..2965469(+) (priA) [Acinetobacter sp. YH16056_T]
ATGGCAAATTCAGCGAGCATTGCAACACCTATTTACCGCGTTCGAGTCGCCGTTCCGGTATATTTATACGACTGCTTCGA
TTACAGCTTAAACCAAGAGCAATACCAACAAGCTGAAGTAGGTGCACGCGTTGCTGTATCTTTTGGTCGGCAAAATTTGA
CCGGTATCATCGTGGAAAAAATTGCTCCCGATGCACCACTCGATTCAAGCTTTAAACTCAAGGCCATTACCGAACTTCTT
GATGATCGTGCCATTTTAGATGAGAAAGTTTTAAATTTATTGACATGGTCTGCACAGTATTACCAATTTCCGATTGGTGA
AGTGATGCAAAGTGCCCTTCCGACGCTGTTACGCCAAGGAAAGCCCTATAATTTATTGGCACGGACATGGAATCTGATTG
ACCATAATGCTGAAGCCAAAATTAAACGTTCAGAGCGTCAACAAGAGGCGTATAAAATACTAAAATTACATCCCACAGGC
ACAGGTGAAAATCTTTTAAATTTGTCAGGTGTGGAAACCGCGACACTCAAAGCATTAGAGAAAAAAGGCATCTGCCAATG
TGTCTTGGCGGAACAGGACTTTAGCCCGATGCCCATGAGCATGGCGCAAATGCCACTCACTGCAAATCCTGAGCAAAAGA
AAGCCATTGATCGGGTGTTAAAGGCGCGTAATCAATATCAGGCATTTTTACTTGATGGTCTCACCGGCAGTGGTAAAACC
GAAGTCTATTTACAAATCATGCAAGAGATTCTAAAGCAAGGCAAACAAGTCTTGGTTTTAGTGCCTGAAATTGGACTTAC
CCCACAGACCATCAGCCGTTTCCAATCACGCTTTCATTGCAATATTGCTCTACTACATTCGGGTTTGAACGATTCAAAAC
GTATGCAAGCTTGGCAAGCAGCGCAAACGGGCAAGGCGTCTATTATCTTAGGCACGCGTTCTGCGATTTATACCCCACTG
CCGAATCTAGGTTTAATTGTGATTGATGAAGAGCATGATCTGTCCTTTAAACAACAAGAAGGCTTTCGCTATTACGCTCG
GGATGTCGCACTTTACCGTGGGCATCTGGAACAATGCCCTGTCATTTTAGGTTCTGCCACGCCTAGTATCGAGTGCTATG
CACTGGCGAAACAAGGCAAAATGACCGTACTGGAATTGAACCAACGTGCGGGCACTGCGGTCATGCCGAAAATGCACATC
CTTGATCTGAAAGTGGCACAGAAACAGCATGGAATCAGCCAACTTTTGATTGGTGAAATCCGTAAACGGCTTGAAAAAAA
AGAGCAAGTATTGGTGTTTTTAAACCGCCGGGGTTATGCACCTGTACTGATTTGTGAAAGTTGTGCATGGCAAGCTAAAT
GCCCACATTGTGATGCCAATTTCACGGTACACCGCACACCCTATCAACACCTACATTGTCACCACTGCGGCACCATTCAC
CGTATGCCAGAGCATTGTCCACAGTGTAATCACCAAGAACTGAAATCCGTGGGTATGGGTACAGCGAAGGTTGAAGAAAG
CCTAAATGAGCTATTTCCGCAGCATGACGTTATACGGGTCGATCGTGATTCCACCAGTCGGGTCGGCAGTTGGCAAAAAA
TCTATGACAAGATTCAAAAAAGCGAACCTGCCATTTTACTCGGTACACAAATGCTGGCCAAAGGACATCATTTCCCTTAC
GTCACCTTGGTGGCGATTTTAGATATCGATTCAGGTCTACTGAGTGTGGACTTCCGTGCCATCGAGCGTACTGCACAGCT
CATTGTACAAGTCACTGGGCGTGCCGGCCGTGGTGAACGTAAAGGCGATGTGTTTTTACAAACCCTAAGACCCGACCATC
CGCTTTTGAATATCTTGGTCAATGAGGACTATCGAAAATTTGCCAAAGAAACCATGAAAGAACGGGAAATGGCACAAATG
CCACCGTTTCGCTATGCCGCATTGGTGCGCTGTGAGTCCAAAAACCAAGAACTCAATACTGAATTTTTACAGCAACATGC
CCAATTGCTGCGTCAGGACTCTGCTGGAATTATTGACATTTGGGGGCCGATTCCTGCCCCGATGGAGCGCAAAGCGGGAC
GTTATCAATCCCACATGGTTTTACTGTCTACAGATCGTGCGCGCTTACATTATTATCTGCGTTATTGGTGGCAAAACATC
TTGCATAACAAGCCATCAAATATGAAATTGAGCCTCGATATAGACCCACAGGAACTCAGTTAA

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(209-369)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.311

98.919

0.705