Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   MST17_RS03995 Genome accession   NZ_CP094545
Coordinates   821120..825634 (+) Length   1504 a.a.
NCBI ID   WP_180025836.1    Uniprot ID   -
Organism   Acinetobacter sp. YH16056_T     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 816120..830634
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MST17_RS03970 (MST17_03970) - 816576..817169 (-) 594 WP_373683064.1 hypothetical protein -
  MST17_RS03975 (MST17_03975) pilG 817513..817896 (+) 384 WP_078191060.1 twitching motility response regulator PilG Regulator
  MST17_RS03980 (MST17_03980) - 817926..818294 (+) 369 WP_078191059.1 response regulator -
  MST17_RS03985 (MST17_03985) - 818301..818837 (+) 537 WP_078191058.1 chemotaxis protein CheW -
  MST17_RS03990 (MST17_03990) - 818882..820957 (+) 2076 WP_078192256.1 methyl-accepting chemotaxis protein -
  MST17_RS03995 (MST17_03995) chpA 821120..825634 (+) 4515 WP_180025836.1 Hpt domain-containing protein Regulator
  MST17_RS04000 (MST17_04000) - 825638..826105 (+) 468 WP_168379297.1 hypothetical protein -
  MST17_RS04005 (MST17_04005) dapE 826174..827307 (-) 1134 WP_180025835.1 succinyl-diaminopimelate desuccinylase -
  MST17_RS04010 (MST17_04010) - 827429..827578 (-) 150 WP_078191053.1 entericidin A/B family lipoprotein -
  MST17_RS04015 (MST17_04015) - 827733..828596 (-) 864 WP_180025834.1 DUF1853 family protein -
  MST17_RS04020 (MST17_04020) - 828685..829119 (+) 435 WP_180025833.1 YbaN family protein -
  MST17_RS04025 (MST17_04025) elsL 829112..829606 (+) 495 WP_180007533.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1504 a.a.        Molecular weight: 167987.92 Da        Isoelectric Point: 4.3487

>NTDB_id=670133 MST17_RS03995 WP_180025836.1 821120..825634(+) (chpA) [Acinetobacter sp. YH16056_T]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFEELAGLFTTWLENPQDKDTLTTIRRHFHTLKGSGRMVGAKSA
GESAWAVEDTLNRVIAGSVQLTPTVQKFAQTVLNVYQYKLYPRFKNVAELDVDLRPLVLMGQQLQQNISLEPALEELLKL
ADQLKSEDAVTGLELTEVETTEHVEVVESTIDAVAESETNLEQVDADASLVEETVSIFIEEAEEHLQTIDQFLQSDDSKS
QDYNGLIRALHTLRGSSSMAQIEEIFEASSKVENLFKTLLQDEIVSSSKETALLIQYAEFVRDYLHVLRSGDKANLASIY
ETFKAAWDDYGFASQDQLAPEDNPQGLVSKLIELNIDQLLDAEFEFDKRALAEFPDYIQQLSQQALELIEHTDNRASVGI
HDFTTQMRAAYQSLIEKPELLHADYGYELFAQAHQEFIHLFDTLAAGQRVVLSEEVQRFLNELAAFVQQDIEAVAATTTQ
EANIVAEPVATAEDKAAVPNTTAVDFAQLSQRIQLDHQQMQAADANNDFDEDLLGIFIEEAEELLVGIDQDLSTWTRDKT
NTSALNNLMRYLHTLKGGANMIAASHVGLISHELESIYERIIRQQISITPALIQIIRLVQDDISDRIQTIRDQGIDYPAN
NVIDILRNIQSIVAGEHSEPVALASAPILAETEQAAVEPDVSVSEPMNVVEDTAEAVVEAQTTAHTESAVEHLEHAVADH
VEHPDDDLRSVMEETFLEESEEILEQAVQLLNQWTEQRSDRNVLLQLQRAAHSIKGGARMVENEPVAAIAYQLETTFEHF
AVHHFNSNAYDGLLKTTLAWLKEAIFNHDYSNFDSIKLSLESIQYVDVTVQLPNRVAELEQGIVSKGFEFIQGDGVEPPS
MLGEWTEANSSDNSNEMIRISADLVEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMDGELESQIIA
KHGSENSRYADFDPLEMDQYSSINQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQSEIQESLMRTRLVPFDRL
LPRLQRIVRQTSSTLNRPAELIVQNTEGELDRTILERLVTPFEHMLRNAVDHGLEDTADRLALKKPEVGSIVLNISRQGT
DVLVSFSDDGKGIDETKIKDKALKLGLIKADQFLDKQEILQLIFHPGFSTAQSVTQISGRGVGLDVVQSEIKALGGHVSV
ESELGKGTTFTIRVPTTVAVSDALMVKAGDQQYAISLAQIERIVRIAPTALETYFNSKDDVFKIDNTNYKLRYLSEFVGN
QPIPRLNNVGHSLPVLLIKGNSGQTIALLVDQLVGSRSQIVVKPIGQQFTSVAAIAGATILGDGHVCLILDGQNIARQIQ
TTQRVKHSAEQRDLGRQSNARRLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDG
FEVTNLVRHHDIHRDLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIEALIAEKQG

Nucleotide


Download         Length: 4515 bp        

>NTDB_id=670133 MST17_RS03995 WP_180025836.1 821120..825634(+) (chpA) [Acinetobacter sp. YH16056_T]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACAACTACGCTTCCTGAAGATAGTTATCTTGATCAAGATGCAGAAATTTT
AGAGATTTTTGTTGAAGAAATAGAAGAAATCTTTGAAGAACTAGCGGGTTTATTTACAACTTGGTTGGAAAATCCACAAG
ATAAAGACACTTTAACGACGATTCGTCGTCATTTCCATACCCTGAAAGGTTCAGGTCGTATGGTCGGGGCAAAATCGGCG
GGTGAATCTGCATGGGCAGTTGAAGATACGCTGAACCGTGTTATTGCGGGTTCAGTACAGTTAACGCCGACCGTTCAAAA
GTTTGCACAAACAGTTTTAAATGTTTATCAATATAAGCTCTATCCACGGTTTAAAAATGTTGCCGAATTGGATGTTGACT
TACGTCCATTGGTTTTAATGGGGCAACAATTACAACAAAATATTAGCCTTGAGCCTGCACTCGAAGAATTATTAAAACTG
GCAGATCAATTAAAATCTGAAGATGCTGTCACTGGTTTAGAGCTGACTGAAGTTGAAACTACAGAACATGTGGAAGTAGT
TGAAAGCACGATCGATGCAGTGGCCGAATCAGAAACAAATCTTGAGCAAGTGGATGCAGATGCATCACTGGTCGAAGAGA
CTGTGAGCATTTTTATTGAAGAAGCTGAAGAACATCTACAAACGATTGATCAGTTCCTCCAATCTGATGATAGTAAATCA
CAAGACTATAATGGCTTGATTCGCGCGCTACACACCTTACGTGGTAGTTCGTCGATGGCACAAATCGAAGAGATTTTTGA
AGCCAGTTCAAAAGTTGAAAATTTATTCAAAACCTTATTGCAAGACGAAATCGTATCGAGCTCGAAAGAAACTGCTTTAT
TGATTCAATATGCTGAATTTGTTCGTGATTATTTACACGTGCTCCGTTCAGGGGATAAGGCAAATCTTGCGTCTATTTAT
GAAACCTTCAAAGCCGCTTGGGATGATTATGGTTTTGCAAGCCAAGATCAATTGGCGCCTGAAGATAATCCGCAAGGTTT
GGTTTCTAAACTAATCGAATTAAATATTGATCAGTTATTAGATGCTGAATTTGAGTTTGATAAACGTGCTCTAGCTGAAT
TCCCAGACTATATTCAACAGCTCAGTCAACAAGCTTTAGAGTTGATTGAACATACGGATAATCGTGCGTCTGTTGGTATC
CATGATTTCACGACTCAAATGCGTGCAGCGTATCAGTCTTTAATTGAAAAGCCTGAATTGCTCCATGCTGATTATGGATA
TGAGTTATTTGCACAAGCGCATCAAGAATTCATTCACTTATTTGACACCTTAGCTGCGGGTCAGCGTGTGGTGTTAAGTG
AAGAGGTTCAGCGTTTCTTAAATGAGCTAGCTGCATTTGTTCAACAAGACATTGAAGCAGTTGCAGCAACGACTACACAA
GAAGCCAATATCGTTGCCGAACCTGTTGCCACTGCAGAAGATAAAGCCGCTGTTCCAAATACAACAGCAGTAGACTTTGC
ACAATTAAGTCAGCGTATCCAACTTGATCATCAACAGATGCAAGCGGCGGATGCGAATAATGACTTTGATGAAGATCTTT
TAGGGATCTTTATTGAAGAGGCAGAAGAATTATTGGTGGGGATTGACCAAGACCTCAGTACTTGGACACGTGATAAGACC
AATACTTCAGCTTTGAATAATTTAATGCGTTATTTGCATACCCTAAAAGGTGGTGCAAATATGATTGCCGCGTCTCATGT
GGGTTTAATTTCGCATGAATTGGAGTCAATTTATGAGCGCATTATTCGTCAGCAAATTTCGATTACTCCTGCGTTAATTC
AAATTATTCGCTTGGTGCAGGATGATATTTCAGATCGTATTCAAACCATTCGTGACCAAGGGATCGACTACCCAGCGAAT
AATGTGATCGATATTCTAAGGAATATTCAGTCAATTGTGGCAGGAGAACATTCAGAACCTGTTGCATTGGCTTCGGCTCC
TATTTTAGCTGAAACTGAACAAGCAGCAGTAGAACCAGATGTATCGGTGTCAGAGCCGATGAATGTTGTTGAAGACACAG
CAGAAGCAGTGGTTGAAGCTCAAACGACTGCTCACACTGAGTCCGCTGTTGAACATCTTGAACATGCGGTTGCTGATCAT
GTTGAGCATCCAGATGATGATCTACGTTCTGTCATGGAAGAAACCTTCCTTGAAGAGTCTGAGGAAATTCTTGAACAAGC
CGTTCAATTATTAAATCAATGGACTGAACAACGTAGTGACCGTAACGTATTGCTTCAATTACAACGTGCTGCCCACAGTA
TTAAGGGTGGTGCGCGTATGGTTGAAAATGAACCTGTTGCCGCAATTGCGTATCAACTTGAGACGACGTTTGAGCATTTC
GCGGTTCATCATTTCAACTCAAATGCATATGACGGCTTACTCAAAACGACGTTGGCATGGTTAAAAGAAGCGATCTTCAA
CCACGACTATAGTAATTTTGACAGCATCAAATTGAGCTTAGAGTCCATTCAATATGTGGATGTTACGGTTCAACTGCCAA
ACCGTGTTGCAGAATTGGAACAAGGTATCGTCAGCAAAGGCTTTGAATTTATTCAAGGTGATGGTGTTGAACCGCCATCG
ATGTTGGGTGAGTGGACTGAAGCCAATTCTTCTGATAACAGCAATGAGATGATTCGTATCTCGGCTGATCTCGTCGAGAA
GATGATTGACTTATCAGGCGAAAACTCGATTAACCGTTCACGTATTGAAATGGACTTAGGTCAGCTAGGCAATACCTTGA
ATGAAATGGAGTTAGCAATTAAGCGACTTGCTGACCAGTTACGTCGAATGGATGGTGAGCTTGAGTCACAAATTATTGCC
AAACATGGTTCTGAAAATTCACGCTATGCGGATTTCGACCCATTGGAGATGGACCAATATTCATCGATTAACCAATTGTC
AAAATCTCTAGCCGAATCTGCGTCGGATTTGGTTGACTTCAAGAGTACTTTGGCAGAAAAAATCCGTGATGCGGAAGGTC
TGTTATTACAACAATCACGTATTCAGTCAGAAATTCAAGAAAGTCTGATGCGTACCCGTTTGGTGCCATTTGATCGTTTG
TTACCACGTTTACAACGTATTGTGCGTCAAACCTCTTCGACCTTGAACCGTCCTGCAGAATTGATTGTTCAAAATACAGA
AGGTGAATTGGACCGTACGATCTTAGAGCGTTTGGTGACACCATTTGAACATATGCTGCGTAATGCGGTCGACCATGGTT
TAGAAGATACTGCTGACCGTTTGGCTTTAAAAAAGCCAGAAGTAGGTAGCATCGTCTTGAACATTAGTCGTCAGGGTACT
GATGTACTGGTGTCTTTCAGTGATGATGGTAAAGGGATTGATGAAACCAAAATTAAAGACAAAGCCTTAAAACTTGGTTT
AATCAAAGCGGATCAGTTCCTCGATAAACAAGAAATCTTGCAATTGATCTTCCATCCAGGTTTCTCAACGGCACAATCGG
TAACGCAAATTTCGGGTCGTGGTGTTGGTCTGGATGTGGTGCAAAGTGAAATTAAAGCCTTGGGTGGTCATGTTTCCGTT
GAGTCTGAGTTAGGTAAAGGGACGACCTTTACCATTCGTGTACCAACCACAGTAGCGGTCAGCGATGCCTTGATGGTGAA
AGCGGGCGATCAGCAATATGCGATTTCATTAGCGCAAATTGAACGTATTGTCCGTATTGCACCTACGGCACTCGAAACTT
ACTTCAATAGTAAGGATGACGTGTTTAAAATTGACAACACCAATTACAAACTACGTTATCTATCAGAGTTTGTGGGTAAT
CAGCCAATTCCACGTTTAAATAATGTCGGCCATTCATTGCCTGTATTGCTAATAAAAGGCAACAGTGGTCAAACCATTGC
TTTATTGGTAGATCAGCTGGTGGGTTCACGTTCTCAAATCGTGGTGAAACCAATTGGTCAACAATTTACCAGTGTGGCCG
CGATTGCAGGTGCCACGATTCTAGGTGATGGTCATGTATGTTTGATTTTGGATGGGCAAAATATTGCACGTCAAATTCAA
ACTACGCAGCGTGTTAAACATTCAGCTGAACAGCGTGATTTGGGCCGTCAATCCAATGCACGTCGTTTAGTGATGATTGT
CGATGACTCGGTGACAGTACGTAAGGTGACTTCACGCTTACTTGAACGTCAAGGTTATGACATCGTGACCGCGAAAGATG
GTGTAGATGCAATTGAGCAGCTTGAAAATGTCCGTCCAGACTTGATGCTACTCGATATTGAAATGCCACGTATGGATGGT
TTCGAAGTGACAAACTTAGTCCGTCACCACGACATTCACCGTGACTTGCCAATCATTATGATTACATCGCGTACTGGTGA
AAAACATCGTGAGCGTGCATTTAGCTTAGGTGTGACTCACTATATGGGTAAACCATTCCAAGAAGCTGAATTGCTTGCCA
ATATTGAAGCTTTAATTGCAGAAAAGCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.735

100

0.615