Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG788_RS25600 Genome accession   NZ_CP109040
Coordinates   5822485..5823609 (-) Length   374 a.a.
NCBI ID   WP_351542496.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00647     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5817485..5828609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG788_RS25575 (OG788_25595) cseB 5818294..5819001 (-) 708 WP_406373683.1 two-component system response regulator CseB -
  OG788_RS25580 (OG788_25600) - 5819021..5819671 (-) 651 WP_406373684.1 hypothetical protein -
  OG788_RS25585 (OG788_25605) - 5819659..5820198 (-) 540 WP_266761288.1 SigE family RNA polymerase sigma factor -
  OG788_RS25590 (OG788_25610) - 5820450..5821367 (-) 918 WP_406373686.1 A/G-specific adenine glycosylase -
  OG788_RS25595 (OG788_25615) - 5821559..5822383 (+) 825 WP_406373688.1 hypothetical protein -
  OG788_RS25600 (OG788_25620) disA 5822485..5823609 (-) 1125 WP_351542496.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG788_RS25605 (OG788_25625) radA/sms 5823678..5825087 (-) 1410 WP_266761296.1 DNA repair protein RadA Machinery gene
  OG788_RS25610 (OG788_25630) - 5825482..5827290 (+) 1809 WP_406373690.1 BACON domain-containing protein -
  OG788_RS25615 (OG788_25635) - 5827345..5828184 (-) 840 WP_406373692.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40069.80 Da        Isoelectric Point: 4.9234

>NTDB_id=670079 OG788_RS25600 WP_351542496.1 5822485..5823609(-) (disA) [Streptomyces sp. NBC_00647]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYPIVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLTLQLDELIA
GVEPDRELVVRDYVPEPTAKRSRTVDEALSELDALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=670079 OG788_RS25600 WP_351542496.1 5822485..5823609(-) (disA) [Streptomyces sp. NBC_00647]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAATCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCGCACT
CAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTTGAACGAATTCTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTCGGACAAGACCGTCGAAGCGATGTGCACGGGCGGTTTTGTCCTGGATGTCGAGTTCACCGCGACCCGTCTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTCGACAAGGACATCACCAAGATCCTTCGGGCGGGCGTGCAGCTCGTGCC
CGACCCGACGATCCCGACGGAGGAGACGGGCACGCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGGCTACCCCA
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACGCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGATCTCGTCACGGTCCGGGACGTCTCCGCGGTCGCCCAGCGTCTGGAGATGGTGCGCCGCATCG
CCACCGAGATCGCCGAGTACGTCGTCGAACTGGGCACCGACGGGCGTCTGCTGACCCTCCAGCTCGACGAGCTGATCGCC
GGCGTCGAGCCCGATCGCGAGCTGGTCGTCCGGGACTACGTGCCCGAGCCGACCGCCAAGCGTTCCCGCACGGTCGACGA
GGCGCTGTCCGAGCTGGACGCGCTCAGCCACGCGGAGCTCCTCGAACTTTCCACAGTGGCACGGGCGTTGGGTTACACCG
GCTCCCCCGAGGCGCTCGACTCCGCGGTCTCCCCGCGTGGTTTCCGCCTCCTCGCCAAGGTGCCGCGGCTGCCGGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGGCTCCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTGCAGACGGTCGA
CGGCGTGGGCGAGGCCCGGGCGCGCAGCGTCCGCGAGGGCCTGTCCCGGCTGGCGGAGTCGTCGATCCTGGAGCGTTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436