Detailed information NTG0066987

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7R20_RS22530
• Genome accession: NZ_AP022222
• Coordinates: 4734315..4735340 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain WP8-S17-ESBL-12
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4729315..4740340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7R20_RS22510 (WP8S17E12_43480)	metJ	4730500..4730817 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
H7R20_RS22515 (WP8S17E12_43490)	yiiX	4730877..4731485 (+)	609	WP_000702318.1	YiiX family permuted papain-like enzyme	-
H7R20_RS22520 (WP8S17E12_43500)	rpmE	4731546..4731758 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7R20_RS22525 (WP8S17E12_43510)	priA	4731961..4734159 (+)	2199	WP_001309891.1	primosomal protein N'	Machinery gene
H7R20_RS22530 (WP8S17E12_43520)	cytR	4734315..4735340 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
H7R20_RS22535 (WP8S17E12_43530)	ftsN	4735432..4736391 (+)	960	WP_000068844.1	cell division protein FtsN	-
H7R20_RS22540 (WP8S17E12_43540)	hslV	4736484..4737014 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7R20_RS22545 (WP8S17E12_43550)	hslU	4737024..4738355 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
H7R20_RS22550 (WP8S17E12_43560)	menA	4738422..4739348 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7R20_RS22555 (WP8S17E12_43570)	rraA	4739441..4739926 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=66987 H7R20_RS22530 WP_000644904.1 4734315..4735340(+) (cytR) [Escherichia coli strain WP8-S17-ESBL-12]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=66987 H7R20_RS22530 WP_000644904.1 4734315..4735340(+) (cytR) [Escherichia coli strain WP8-S17-ESBL-12]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628