Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG866_RS02895 Genome accession   NZ_CP109027
Coordinates   613931..614602 (-) Length   223 a.a.
NCBI ID   WP_329331756.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00663     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 608931..619602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG866_RS02865 (OG866_02845) - 609191..609838 (+) 648 WP_329331750.1 dihydrofolate reductase family protein -
  OG866_RS02870 (OG866_02850) pgm 609860..611500 (-) 1641 WP_329331751.1 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) -
  OG866_RS02875 (OG866_02855) - 611644..612279 (+) 636 WP_329331752.1 class I SAM-dependent methyltransferase -
  OG866_RS02880 (OG866_02860) - 612422..612928 (+) 507 WP_329331753.1 cupin domain-containing protein -
  OG866_RS02885 (OG866_02865) - 612934..613185 (-) 252 WP_329331754.1 hypothetical protein -
  OG866_RS02890 (OG866_02870) - 613529..613924 (-) 396 WP_329331755.1 GNAT family N-acetyltransferase -
  OG866_RS02895 (OG866_02875) dinR/lexA 613931..614602 (-) 672 WP_329331756.1 transcriptional repressor LexA Regulator
  OG866_RS02900 (OG866_02880) - 614716..615405 (+) 690 WP_329331757.1 2-phosphosulfolactate phosphatase -
  OG866_RS02905 (OG866_02885) - 615402..615815 (-) 414 WP_329331759.1 cupin domain-containing protein -
  OG866_RS02910 (OG866_02890) - 615868..616884 (-) 1017 WP_329331760.1 zinc-dependent alcohol dehydrogenase family protein -
  OG866_RS02915 (OG866_02895) - 617057..617938 (+) 882 WP_329331761.1 helix-turn-helix transcriptional regulator -
  OG866_RS02920 (OG866_02900) - 617891..618431 (-) 541 Protein_583 XdhC family protein -
  OG866_RS02925 (OG866_02905) - 618459..618617 (-) 159 WP_329331762.1 hypothetical protein -

Sequence

Protein


Download         Length: 223 a.a.        Molecular weight: 24191.61 Da        Isoelectric Point: 5.6609

>NTDB_id=669520 OG866_RS02895 WP_329331756.1 613931..614602(-) (dinR/lexA) [Streptomyces sp. NBC_00663]
MENTAPARRGRPPGPRVAEGELTSRQAAIVRYITETVARQGYPPSMREIGHAVELASTSSVAHQLMVLERKGVLYRDPHT
PRAYQVRPSWAPDLGHRGAEPVEVPLVGRIAAGAPLLADEMVEDVYSLPRQVVGDGELFALTVSGDSMIEAAICDGDIVT
VRRQDSADHGDIVAALLEDEATVKVLRRQDGQVWLMPRNPAYQPIPGDQAQILGKVVGVLRVL

Nucleotide


Download         Length: 672 bp        

>NTDB_id=669520 OG866_RS02895 WP_329331756.1 613931..614602(-) (dinR/lexA) [Streptomyces sp. NBC_00663]
ATGGAGAACACAGCGCCCGCCCGCCGGGGCCGCCCCCCGGGTCCCCGGGTCGCCGAAGGAGAGCTGACGAGCCGCCAGGC
GGCCATCGTCCGCTACATCACCGAGACCGTCGCCCGGCAGGGCTACCCGCCGTCGATGCGCGAGATCGGCCATGCCGTGG
AACTCGCCAGTACGTCCTCGGTCGCCCACCAGCTGATGGTGCTGGAGCGCAAGGGCGTTCTCTACCGCGACCCCCACACC
CCCCGCGCCTACCAGGTCCGCCCCTCCTGGGCACCCGACCTGGGCCACCGCGGCGCGGAACCCGTCGAAGTGCCCCTCGT
CGGCCGGATCGCGGCCGGCGCACCGCTGCTCGCTGACGAGATGGTGGAGGACGTCTACTCCCTGCCCCGGCAGGTCGTGG
GCGACGGAGAGCTGTTCGCCCTGACGGTGTCCGGCGACTCGATGATCGAGGCGGCGATCTGCGACGGCGACATCGTGACC
GTCAGACGCCAGGACAGCGCCGACCATGGGGACATCGTCGCCGCGCTCCTGGAGGACGAGGCCACCGTGAAGGTGCTCCG
CCGCCAGGACGGACAGGTGTGGCTGATGCCCCGCAACCCCGCCTACCAGCCGATCCCGGGCGACCAGGCCCAGATCCTCG
GCAAGGTGGTCGGAGTCCTGCGCGTCCTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(21-83)

Peptidase S24-like (Peptidase_S24)

(105-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

43.902

91.928

0.404