Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MQC90_RS04725 Genome accession   NZ_CP094361
Coordinates   925229..926023 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain NCIB 3610     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 920229..931023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MQC90_RS04695 sxzA 921068..922099 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  MQC90_RS04700 yfhB 922214..923095 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  MQC90_RS04705 yfhC 923183..923767 (+) 585 WP_003243940.1 nitroreductase -
  MQC90_RS04710 yfhD 923806..923997 (-) 192 WP_003233561.1 YfhD family protein -
  MQC90_RS04715 yfhE 924064..924174 (-) 111 WP_003223230.1 YfhE family protein -
  MQC90_RS04720 yfhF 924229..925140 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  MQC90_RS04725 recX 925229..926023 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  MQC90_RS04730 yfhH 926025..926339 (+) 315 WP_003244592.1 YfhH family protein -
  MQC90_RS04735 yfhI 926482..927675 (+) 1194 WP_003243500.1 MFS transporter -
  MQC90_RS04740 sspK 927708..927860 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  MQC90_RS04745 yfhJ 927985..928254 (+) 270 WP_003243789.1 YfhJ family protein -
  MQC90_RS04750 yfhK 928399..928917 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  MQC90_RS04755 spdL 929002..929334 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  MQC90_RS04760 ephM 929321..930181 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=669256 MQC90_RS04725 WP_003243354.1 925229..926023(+) (recX) [Bacillus subtilis strain NCIB 3610]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=669256 MQC90_RS04725 WP_003243354.1 925229..926023(+) (recX) [Bacillus subtilis strain NCIB 3610]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment