Detailed information NTG0669147

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: MRB47_RS04880
• Genome accession: NZ_CP094346
• Coordinates: 1046213..1047361 (-)
• Length: 382 a.a.
• NCBI ID: WP_252102057.1
• Uniprot ID: -
• Organism: Diaphorobacter sp. LI3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1041213..1052361

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MRB47_RS04860 (MRB47_04860)	-	1042583..1043299 (-)	717	WP_252102054.1	Crp/Fnr family transcriptional regulator	-
MRB47_RS04865 (MRB47_04865)	-	1043536..1044546 (-)	1011	WP_252102055.1	Bug family tripartite tricarboxylate transporter substrate binding protein	-
MRB47_RS04870 (MRB47_04870)	rpoH	1044673..1045608 (-)	936	WP_088888417.1	RNA polymerase sigma factor RpoH	-
MRB47_RS04875 (MRB47_04875)	cutA	1045800..1046162 (+)	363	WP_252102056.1	divalent-cation tolerance protein CutA	-
MRB47_RS04880 (MRB47_04880)	pilA	1046213..1047361 (-)	1149	WP_252102057.1	signal recognition particle-docking protein FtsY	Machinery gene
MRB47_RS04885 (MRB47_04885)	-	1047391..1048845 (+)	1455	WP_252102058.1	M16 family metallopeptidase	-
MRB47_RS04890 (MRB47_04890)	-	1048861..1050243 (+)	1383	WP_252102059.1	M16 family metallopeptidase	-
MRB47_RS04895 (MRB47_04895)	rsmD	1050240..1050863 (+)	624	WP_252102060.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
MRB47_RS04900 (MRB47_04900)	coaD	1051008..1051505 (+)	498	WP_252102061.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 39893.68 Da
• Isoelectric Point: 5.7376

>NTDB_id=669147 MRB47_RS04880 WP_252102057.1 1046213..1047361(-) (pilA) [Diaphorobacter sp. LI3]
MFSFFKKKPPAPTEPALAPEDVASPAAPPAAEAPASGGAFGWLRKPFGAGATSVPEPAAPSAGAPAAIDAPLAVPEPTPK
PEGARQGWMDRLKSGLRKTGSSIATVFTGTQINEALYDELEEALLMADTGVKATQHLLEDLKRRVKETKTTEPAAVKGLL
ADALADLLRPLEKPLVIGEHTPTVIMVAGVNGAGKTTSIGKLTKHLADHGESVLLAAADTFRAAAREQLGVWATRNTVEI
VSQEGGDPAAVSFDAVTAGRARGKDVVLVDTAGRLPTQLHLMEELKKIRRVVTKADASAPHEVLLVIDGNTGQNALAQVR
AFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPVPVYFIGVGEKVEDLETFSAREFAQALLT

Nucleotide

• Length: 1149 bp

>NTDB_id=669147 MRB47_RS04880 WP_252102057.1 1046213..1047361(-) (pilA) [Diaphorobacter sp. LI3]
ATGTTCAGTTTTTTCAAGAAGAAACCGCCCGCCCCCACCGAACCCGCCCTTGCACCCGAGGACGTGGCCAGCCCTGCGGC
ACCACCCGCGGCCGAAGCCCCTGCCAGCGGCGGCGCATTCGGCTGGCTGCGCAAGCCCTTTGGCGCAGGCGCCACCAGCG
TGCCGGAGCCGGCTGCCCCTTCGGCCGGCGCCCCCGCAGCCATCGACGCGCCCCTTGCCGTCCCCGAGCCCACCCCGAAG
CCCGAGGGCGCACGCCAGGGCTGGATGGACCGGCTGAAATCCGGCCTGCGCAAGACCGGCAGCAGCATCGCGACCGTCTT
CACGGGCACGCAGATCAACGAGGCGCTGTACGACGAGCTGGAGGAAGCCCTGCTCATGGCCGACACCGGGGTGAAAGCCA
CGCAGCACCTGCTGGAGGACCTCAAGCGCCGCGTGAAAGAAACCAAGACCACCGAGCCTGCTGCCGTAAAGGGACTGCTG
GCCGATGCGCTGGCCGACCTGCTGCGGCCGCTGGAAAAGCCCCTGGTGATCGGCGAGCACACACCCACCGTGATCATGGT
GGCCGGCGTGAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTCACCAAGCATCTGGCCGACCATGGCGAGAGCGTGC
TGCTGGCCGCCGCCGATACCTTCCGCGCCGCGGCGCGCGAGCAGTTGGGTGTCTGGGCCACGCGCAACACGGTGGAGATC
GTCAGCCAGGAAGGGGGCGACCCTGCCGCCGTGAGCTTTGACGCCGTTACCGCCGGCCGCGCGCGCGGCAAAGATGTGGT
GCTGGTGGACACTGCCGGCCGCCTGCCTACGCAGCTGCACCTGATGGAAGAGCTGAAGAAGATCCGCCGCGTGGTCACCA
AGGCCGATGCCAGCGCCCCGCACGAGGTGCTGCTGGTGATCGACGGCAACACCGGCCAGAACGCGCTGGCGCAGGTGCGC
GCGTTCGACGACGCGCTTCAACTCACCGGCCTGATCGTCACCAAACTGGATGGCACGGCCAAGGGCGGCGTGCTGGCCGC
CATCGCGCAGGAGCGGCCCGTGCCCGTGTACTTCATTGGCGTGGGCGAGAAGGTGGAAGACCTGGAGACCTTCAGCGCAC
GCGAATTCGCCCAGGCCCTGCTGACCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (182-381)

• SRP54-type protein, helical bundle domain (SRP54_N) (101-164)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.36	100	0.55