Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MRB47_RS04590 Genome accession   NZ_CP094346
Coordinates   984684..985076 (+) Length   130 a.a.
NCBI ID   WP_015914196.1    Uniprot ID   A0AAX1WT95
Organism   Diaphorobacter sp. LI3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 979684..990076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MRB47_RS04570 (MRB47_04570) - 980190..981950 (-) 1761 WP_252102027.1 alkaline phosphatase D family protein -
  MRB47_RS04575 (MRB47_04575) hemL 982132..983436 (-) 1305 WP_015914198.1 glutamate-1-semialdehyde 2,1-aminomutase -
  MRB47_RS04580 (MRB47_04580) - 983420..984364 (-) 945 WP_011806677.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  MRB47_RS04585 (MRB47_04585) - 984480..984632 (+) 153 WP_011806676.1 rubredoxin -
  MRB47_RS04590 (MRB47_04590) pilG 984684..985076 (+) 393 WP_015914196.1 PleD family two-component system response regulator Regulator
  MRB47_RS04595 (MRB47_04595) - 985088..985453 (+) 366 WP_011806674.1 PleD family two-component system response regulator -
  MRB47_RS04600 (MRB47_04600) - 985470..985997 (+) 528 WP_011806673.1 chemotaxis protein CheW -
  MRB47_RS04605 (MRB47_04605) - 986019..988283 (+) 2265 WP_252102028.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14449.60 Da        Isoelectric Point: 6.9235

>NTDB_id=669146 MRB47_RS04590 WP_015914196.1 984684..985076(+) (pilG) [Diaphorobacter sp. LI3]
MATTTTGPTFRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNAR
FADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNAQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=669146 MRB47_RS04590 WP_015914196.1 984684..985076(+) (pilG) [Diaphorobacter sp. LI3]
TTGGCTACGACGACGACCGGTCCCACCTTCCGTGTCCTGGTGGTGGACGACAGCAATACCATACGGCGCAGCGCCGAAAT
TTTCCTCAAGCAGGGAGGGCACGAGGTTTTATTGGCCGACGATGGTTTCGATGCCTTGGCCAAAGTCAATGATTACCAGC
CTCAGCTGATTTTCTGCGACATCCTCATGCCCAAGCTGGATGGTTATCAGACCTGCGCCATCATCAAACGCAACGCGCGT
TTTGCTGATACGCCCGTGGTAATGCTTTCATCCAAGGACGGGGTTTTCGATAAGGCGCGCGGCCGCATGGTCGGTTGCCA
GGAATATCTGACCAAACCATTTACCAAAGACCAGTTGCTGCAGGCTGTGCAGCAATTTGGAAATGCCCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.41

90

0.508

Multiple sequence alignment