Detailed information NTG0066909

Bioinformatically predicted

Overview

• Name: pepF
• Type: Regulator
• Locus tag: LBAT_RS07230
• Genome accession: NZ_AP014808
• Coordinates: 1477755..1479551 (+)
• Length: 598 a.a.
• NCBI ID: WP_060459763.1
• Uniprot ID: A0A0D6A4T0
• Organism: Lactobacillus acetotolerans strain NBRC 13120
• Function: degradation of XIP; competence shut-off (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1479868..1480935	1477755..1479551	flank	317

Gene organization within MGE regions

Location: 1477755..1480935

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LBAT_RS07230 (LBAT_1429)	pepF	1477755..1479551 (+)	1797	WP_060459763.1	oligoendopeptidase F	Regulator

Sequence

Protein

• Length: 598 a.a.
• Molecular weight: 68418.54 Da
• Isoelectric Point: 5.1492

>NTDB_id=66909 LBAT_RS07230 WP_060459763.1 1477755..1479551(+) (pepF) [Lactobacillus acetotolerans strain NBRC 13120]
MAIPKRAEVPENLRWDLTRVFKSDQDWKDEYNKVKSAVQMLSNLKRNFTKSGKDLYDALTKILAVARHLEKVYTYASMAS
DVDTSDAHYLGYVSQVQSLASQFETNTSFINPGVLSISDEKLQQFKKDEPRLKNYDHWLEQITKKRPHTLPANEEKLIAG
AGDAMGVSENTFNVLTNSDMEYGYVQTDDGQMVQLTDGLYSQLIQSQNRNVRKGAFDVMYATYGQFENTLASTLSGVVKE
HNYNARVHNYDSARSAALAENGIPTVVYDTLIKEVNDHIDLLHRYVALRKKILGLKDLQMWDMYVPLTGKPALSYTFEEA
KKEAKKALTPLGDDYLKHVDYIFNNRDIDVVESQNKVTGAYSGGCYDTDPYELLNWEDNIDSLYTLVHETGHSVHSLYTR
ENQPYVYGDYPIFVAEIASTTNENILTEYFLDHIKDPKTKAFILNYYLDSFKGTLYRQTQFAEFEQFIHEADAKGEPLTV
DKLNQFYGNLNQHYYGDAVEPGGNIAKEWARIPHFYYDFYVYQYATGFAAASALANKVVHGTDEQRKAYIGFLKAGSSDY
PTEIMKRAGVDMTKPDYLEDAFNTFAKRLDEFENLIEK

Nucleotide

• Length: 1797 bp

>NTDB_id=66909 LBAT_RS07230 WP_060459763.1 1477755..1479551(+) (pepF) [Lactobacillus acetotolerans strain NBRC 13120]
ATGGCAATTCCAAAAAGGGCAGAAGTTCCAGAAAATTTGAGATGGGACCTTACCCGCGTCTTCAAGTCCGACCAAGATTG
GAAAGATGAATATAACAAAGTAAAAAGCGCAGTGCAAATGTTAAGCAACTTAAAAAGAAACTTTACTAAATCCGGGAAAG
ATCTTTACGATGCTTTAACCAAAATATTGGCTGTGGCCCGTCATTTAGAAAAAGTTTACACATATGCCAGCATGGCTAGC
GACGTAGATACATCTGATGCGCATTATTTAGGCTATGTCAGCCAGGTACAAAGCTTGGCCAGCCAATTTGAAACGAACAC
TTCCTTTATTAATCCGGGAGTTTTGAGTATTTCTGATGAAAAACTTCAGCAATTTAAAAAAGATGAACCAAGATTAAAGA
ATTACGACCACTGGCTTGAACAAATCACTAAGAAACGTCCGCATACCTTGCCCGCTAATGAAGAAAAATTAATAGCAGGA
GCTGGAGACGCGATGGGTGTGTCCGAAAACACCTTTAACGTCTTAACCAACTCTGATATGGAATATGGCTACGTTCAAAC
TGATGATGGACAAATGGTACAGCTAACCGACGGACTATATTCGCAACTCATCCAGTCTCAAAATCGTAATGTCCGTAAGG
GTGCTTTCGATGTCATGTATGCAACTTACGGTCAATTTGAAAACACCCTGGCCTCAACTCTTTCTGGGGTTGTAAAAGAG
CACAATTATAATGCACGCGTACACAACTATGATTCTGCCCGCAGTGCCGCCCTCGCAGAAAATGGTATCCCAACAGTAGT
TTATGACACCTTAATCAAGGAAGTTAATGATCATATAGACCTGCTGCACAGGTACGTTGCCCTTCGTAAAAAGATCTTGG
GATTAAAGGATTTGCAAATGTGGGACATGTACGTTCCGTTAACTGGAAAGCCCGCACTTTCTTATACCTTCGAAGAAGCC
AAAAAAGAGGCTAAGAAAGCTTTAACTCCACTTGGCGATGATTACCTTAAGCACGTTGACTACATCTTTAATAACCGTGA
TATTGACGTTGTCGAGTCACAAAATAAAGTTACCGGCGCATATTCCGGTGGCTGCTACGATACTGACCCGTACGAACTAC
TTAATTGGGAAGACAATATCGATTCACTCTATACTTTAGTCCACGAAACAGGCCACTCCGTTCACAGCTTATACACGCGG
GAGAATCAGCCTTACGTTTACGGTGACTATCCTATCTTTGTGGCCGAAATTGCTTCAACTACTAATGAAAATATTTTGAC
GGAATACTTTTTAGACCATATTAAAGATCCTAAAACCAAAGCCTTCATTTTGAACTATTACCTTGATTCCTTTAAGGGTA
CCTTATACAGGCAGACACAGTTTGCGGAATTTGAGCAGTTTATTCATGAAGCTGACGCCAAGGGTGAACCATTAACGGTA
GACAAATTAAACCAGTTCTATGGCAATCTGAACCAACATTATTATGGGGATGCGGTTGAGCCTGGTGGCAACATTGCTAA
GGAATGGGCAAGAATTCCCCACTTCTACTATGATTTTTACGTTTACCAATACGCTACCGGATTTGCGGCTGCCAGTGCAC
TTGCTAATAAGGTTGTTCACGGAACAGACGAACAGAGAAAAGCTTATATCGGCTTCCTAAAAGCAGGATCTAGCGACTAC
CCAACTGAAATCATGAAGAGGGCTGGGGTTGATATGACTAAGCCTGACTACTTAGAAGATGCATTTAATACTTTTGCAAA
ACGTCTAGATGAATTTGAAAATTTAATTGAAAAATAA

Domains

Predicted by InterproScan.

• Peptidase family M3 (Peptidase_M3) (203-583)

• Oligopeptidase F (Peptidase_M3_N) (115-181)

3D structure

• AlphaFold DB: A0A0D6A4T0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pepF	Streptococcus salivarius strain HSISS4	51.096	99.164	0.507