Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OG506_RS13685 Genome accession   NZ_CP109004
Coordinates   3232397..3233176 (+) Length   259 a.a.
NCBI ID   WP_026151025.1    Uniprot ID   A0ABU4FGW0
Organism   Streptomyces sp. NBC_00696     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3227397..3238176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG506_RS13675 (OG506_13680) - 3228220..3231114 (-) 2895 WP_329552588.1 vitamin B12-dependent ribonucleotide reductase -
  OG506_RS13680 (OG506_13685) nrdR 3231280..3231831 (-) 552 WP_266776797.1 transcriptional regulator NrdR -
  OG506_RS13685 (OG506_13690) dinR/lexA 3232397..3233176 (+) 780 WP_026151025.1 transcriptional repressor LexA Regulator
  OG506_RS13690 (OG506_13695) - 3233316..3235340 (-) 2025 WP_329552589.1 ATP-dependent DNA helicase -
  OG506_RS13695 (OG506_13700) - 3235750..3236721 (-) 972 WP_329552590.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 28037.72 Da        Isoelectric Point: 7.0668

>NTDB_id=668891 OG506_RS13685 WP_026151025.1 3232397..3233176(+) (dinR/lexA) [Streptomyces sp. NBC_00696]
MTTTADSATITAQDRSQGRLEPVHAMNEAANPEGHKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSSSVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLEGEATVKRFKREDGHVWLLPHNSAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=668891 OG506_RS13685 WP_026151025.1 3232397..3233176(+) (dinR/lexA) [Streptomyces sp. NBC_00696]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGATCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCAATGAA
CGAAGCCGCGAATCCCGAGGGACACAAGCGCTCCCTACCGGGCCGACCTCCCGGTATCCGGGCGGACAGCTCGGGGCTCA
CGGACCGGCAGCGCCGGGTGATCGAGGTCATCAGGGACTCGGTGCAGCGCCGGGGATACCCGCCGTCGATGCGCGAGATC
GGCCAGGCCGTGGGCCTGTCCAGCACATCCTCGGTCGCACACCAGCTGATGGCACTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGCCCGCGCGCGTACGAGGTCCGCGGCAGCGACCAGTCCTCGTCGGTGCAGCCCACGGACACCGCGGGCA
AGCCGGCCGCGTCGTACGTCCCGCTCGTGGGCCGGATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAGTCGGTCGAGGAC
GTCTTCCCCCTCCCCCGCCAACTGGTCGGTGACGGTGAGCTGTTCGTCCTGAAGGTCGTCGGTGACTCGATGATCGAGGC
CGCGATCTGCGACGGCGACTGGGTCACCGTGCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTGGCCGCGATGCTTG
AGGGCGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCACGTCTGGCTCCTCCCGCACAACTCGGCCTACGAGCCG
ATCCCGGGCGACGACGCGACGATCCTCGGCAAGGTGGTGGCAGTGCTGCGGCGCGTGTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(51-114)

Peptidase S24-like (Peptidase_S24)

(141-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.972

81.467

0.375