Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG713_RS18510 Genome accession   NZ_CP108987
Coordinates   4255305..4256429 (+) Length   374 a.a.
NCBI ID   WP_020132463.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00723     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4250305..4261429
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG713_RS18495 (OG713_18500) - 4250662..4251540 (+) 879 WP_054241724.1 hypothetical protein -
  OG713_RS18500 (OG713_18505) - 4251755..4253539 (-) 1785 WP_405963603.1 hypothetical protein -
  OG713_RS18505 (OG713_18510) radA/sms 4253815..4255224 (+) 1410 WP_020132462.1 DNA repair protein RadA Machinery gene
  OG713_RS18510 (OG713_18515) disA 4255305..4256429 (+) 1125 WP_020132463.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG713_RS18515 (OG713_18520) - 4256453..4257292 (-) 840 WP_405963604.1 hypothetical protein -
  OG713_RS18520 (OG713_18525) - 4257553..4258485 (+) 933 WP_393823927.1 A/G-specific adenine glycosylase -
  OG713_RS18525 (OG713_18530) - 4258786..4259328 (+) 543 WP_020132466.1 SigE family RNA polymerase sigma factor -
  OG713_RS18530 (OG713_18535) - 4259313..4259972 (+) 660 WP_054241727.1 hypothetical protein -
  OG713_RS18535 (OG713_18540) cseB 4260294..4260995 (+) 702 WP_020132468.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39985.73 Da        Isoelectric Point: 4.9989

>NTDB_id=668677 OG713_RS18510 WP_020132463.1 4255305..4256429(+) (disA) [Streptomyces sp. NBC_00723]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFAATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPIVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELNALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=668677 OG713_RS18510 WP_020132463.1 4255305..4256429(+) (disA) [Streptomyces sp. NBC_00723]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCGGTGCCGACGGCCTGATGCGCGCCGCGCT
GAGCGCGGTGGCTCCCGGCACGGCCCTGCGCGACGGCCTGGAGCGGATCCTTCGCGGCAACACCGGCGGACTCATCGTGC
TGGGCTCCGACAAGACGGTCGAGGCGATGTGCACGGGCGGTTTCGTCCTGGACGTGGAGTTCGCGGCCACGCGCCTGCGT
GAGCTGTGCAAGCTCGACGGGGGCATCGTGGTCTCCTCCGACCTGTCGAAGATCCTCCGGGCCGGCGTCCAGCTGGTGCC
GGACCCCACGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGA
TCGTCTCCGTCTCCCAGTCCATGCGGCTGATCGCCCTGTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTGGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGGCGGCTGCTCGCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGGTCCGGGACTACGTTCCCGAGCCCACGGCCAAGCGGTCCCGTACGGTCGACGA
GGCGCTGTACGAGCTGAACGCGCTCAGTCACGCCGAGCTCCTCGAACTGTCCACGGTGGCGCGCGCGTTGGGCTACACCG
GCTCTCCCGAGGCCCTCGATTCGGCGGTCTCGCCCCGCGGCTTCCGCCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGTCTCGTCGAGCACTTCGGCGGCCTCCAGAAGCTCCTCGCCGCGAGCGTCGACGACCTTCAGACGGTGGA
CGGCGTGGGCGAGGCACGGGCCCGGAGCGTCCGCGAGGGCCTGTCACGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438


Multiple sequence alignment