Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | MQE20_RS07900 | Genome accession | NZ_CP094283 |
| Coordinates | 1654143..1654523 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain NY5301 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1649143..1659523
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MQE20_RS07870 (MQE20_07870) | kdsB | 1650046..1650807 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| MQE20_RS07875 (MQE20_07875) | - | 1650819..1651799 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| MQE20_RS07880 (MQE20_07880) | - | 1651811..1652152 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| MQE20_RS07885 (MQE20_07885) | - | 1652170..1652943 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| MQE20_RS07890 (MQE20_07890) | - | 1652981..1653589 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| MQE20_RS07895 (MQE20_07895) | - | 1653599..1654153 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| MQE20_RS07900 (MQE20_07900) | xcpV | 1654143..1654523 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| MQE20_RS07905 (MQE20_07905) | xcpW | 1654523..1655224 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| MQE20_RS07910 (MQE20_07910) | gspK | 1655224..1656183 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| MQE20_RS07915 (MQE20_07915) | - | 1656414..1657010 (+) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| MQE20_RS07920 (MQE20_07920) | ung | 1657061..1657774 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| MQE20_RS07925 (MQE20_07925) | - | 1657771..1658895 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| MQE20_RS07930 (MQE20_07930) | tadA | 1658902..1659405 (+) | 504 | WP_047938248.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=668594 MQE20_RS07900 WP_000836911.1 1654143..1654523(+) (xcpV) [Acinetobacter baumannii strain NY5301]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=668594 MQE20_RS07900 WP_000836911.1 1654143..1654523(+) (xcpV) [Acinetobacter baumannii strain NY5301]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |