Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   MOW14_RS01720 Genome accession   NZ_CP094258
Coordinates   371573..373795 (-) Length   740 a.a.
NCBI ID   WP_242898185.1    Uniprot ID   -
Organism   Acinetobacter indicus strain BDT201     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 366573..378795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW14_RS01695 (MOW14_01695) - 366795..367064 (-) 270 WP_034598128.1 DUF465 domain-containing protein -
  MOW14_RS01700 (MOW14_01700) - 367141..367479 (-) 339 WP_005181858.1 chaperone modulator CbpM -
  MOW14_RS01705 (MOW14_01705) - 367883..368344 (-) 462 WP_005181860.1 DUF2147 domain-containing protein -
  MOW14_RS01710 (MOW14_01710) - 368755..369630 (-) 876 WP_005181862.1 Hsp33 family molecular chaperone HslO -
  MOW14_RS01715 (MOW14_01715) - 369681..371522 (-) 1842 WP_180006875.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  MOW14_RS01720 (MOW14_01720) priA 371573..373795 (-) 2223 WP_242898185.1 primosomal protein N' Machinery gene
  MOW14_RS01725 (MOW14_01725) gspF 373947..375152 (+) 1206 WP_005181870.1 type II secretion system inner membrane protein GspF -
  MOW14_RS01730 (MOW14_01730) gspG 375209..375646 (+) 438 WP_005181871.1 type II secretion system major pseudopilin GspG -
  MOW14_RS01735 (MOW14_01735) - 375926..376261 (+) 336 WP_045795389.1 hypothetical protein -
  MOW14_RS01740 (MOW14_01740) lnt 376406..377965 (-) 1560 WP_180061613.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84203.32 Da        Isoelectric Point: 8.8817

>NTDB_id=668415 MOW14_RS01720 WP_242898185.1 371573..373795(-) (priA) [Acinetobacter indicus strain BDT201]
MPNSPVHPAPIYRVRVAVPVYLYDGFDYMLSAAEYQQAAVGARVLVSFGRQNLVGIIIEKLPPDHPLDPKIKLKAISELL
DQQPILDQKVLTLLTWSAQYYQFPIGEVMHSALPSLLRQGRPYNLLARMWKLLDDQAEAKLKRSEKQQEAYKVLKLHPSG
TSENILNLAGIETATLKALEKKQICYCDLEQQDFSPVPMTLAQMPLTPNSDQKRAIETVLKAQHRYQAFLLDGLTGSGKT
EVYLQIMQEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAQTGKASIILGTRSAIYTPL
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLEHCPVILGSATPSIDSYALTEQGKMIRLELNQRAGPALMPKIHI
IDLKVAQKQQGLSLLLIQEIKKRLQKKEQVLIFLNRRGYAPVLVCDSCGWQAQCPHCDANFTLHHSPYTHLHCHHCGTIN
RKPEQCPQCQHSELKTLGMGTAKVEENLQHLFPDYEVVRVDRDSTSRVGSWQKIYDRIQTSQPLILLGTQMLAKGHHFPY
VTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGDVYLQTLRPDHPLLSTLVEQDYRAFARQTLKERQAALL
PPFRYTALIRCESKSQEQNQQFLQQHAQWLRENSEQLIDIWGPIPAPMERKAGRYQAHLVLLSQDRARLHFYLRAWWQNM
LHHKPSNMKLSLDIDPQEFS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=668415 MOW14_RS01720 WP_242898185.1 371573..373795(-) (priA) [Acinetobacter indicus strain BDT201]
ATGCCAAATTCGCCCGTTCATCCCGCCCCCATCTACCGTGTTCGTGTAGCTGTTCCGGTCTATCTGTATGACGGGTTTGA
CTATATGCTCAGTGCGGCTGAATATCAGCAGGCTGCCGTTGGCGCGCGGGTGCTGGTGTCCTTTGGCCGGCAGAATCTGG
TGGGCATCATTATTGAAAAACTCCCGCCCGATCATCCGCTTGACCCCAAGATTAAACTGAAAGCCATTAGCGAGCTGCTC
GACCAGCAGCCGATTCTAGATCAGAAAGTTTTAACTTTGTTGACATGGTCGGCGCAGTATTATCAGTTTCCGATTGGCGA
AGTGATGCATAGCGCCCTGCCCAGCCTGTTACGTCAGGGACGCCCGTATAATTTACTGGCACGAATGTGGAAACTACTGG
ATGATCAGGCCGAAGCCAAACTGAAGCGCTCCGAGAAGCAGCAGGAGGCCTATAAAGTCCTGAAGCTGCATCCGAGCGGG
ACTTCAGAAAATATCCTGAATCTGGCCGGTATTGAAACTGCAACCTTAAAAGCGCTGGAAAAAAAGCAGATTTGCTATTG
CGATCTGGAGCAGCAGGATTTTAGCCCGGTGCCAATGACGCTGGCGCAAATGCCGTTAACCCCGAACAGTGACCAGAAAC
GGGCCATTGAAACCGTACTGAAAGCGCAGCATCGTTATCAGGCCTTTTTACTCGATGGTCTGACCGGTAGTGGTAAAACC
GAAGTCTATCTGCAGATCATGCAGGAAGTGCTAAAACAGGGAAAACAGGTATTGGTGCTGGTGCCAGAAATTGGCCTGAC
CCCTCAAACCATTAGCCGCTTCCAGTCTCGTTTTCACTGTCATATTGCGCTGCTGCATTCCGGTTTAAATGACAGCAAAC
GTCTGCAGGCCTGGCAGGCCGCCCAGACTGGCAAGGCTTCGATTATTCTTGGTACACGCTCGGCAATTTATACCCCGCTG
CCCAATCTGGGGCTGATTATTCTGGATGAAGAACACGACCTGTCATTTAAACAGCAGGAAGGCTTTCGTTACCATGCCCG
CGATGTGGCCTTATACCGTGCTCATTTAGAACACTGCCCGGTGATTCTCGGTTCGGCCACGCCCAGCATTGACAGCTATG
CCTTAACGGAACAGGGTAAAATGATCCGTCTGGAACTGAACCAGCGTGCCGGCCCGGCACTGATGCCGAAAATTCACATC
ATTGATTTAAAAGTTGCGCAAAAGCAGCAAGGTCTAAGCCTGCTGCTGATTCAGGAAATCAAAAAACGCCTGCAGAAAAA
AGAACAGGTGCTGATTTTCTTAAACCGCCGTGGTTATGCACCGGTGCTGGTCTGTGACAGCTGCGGCTGGCAGGCACAAT
GCCCACACTGTGATGCCAACTTTACCCTGCATCATAGTCCATATACCCATCTGCATTGCCATCATTGTGGCACCATTAAC
CGCAAGCCAGAGCAATGCCCGCAGTGCCAGCATAGCGAACTGAAAACCCTGGGCATGGGCACGGCCAAGGTTGAAGAAAA
CCTGCAACATCTGTTCCCGGACTATGAGGTGGTGCGGGTAGACCGCGATTCCACCAGCCGCGTCGGCAGCTGGCAAAAAA
TTTATGACCGCATTCAAACCAGCCAGCCGCTGATTCTGCTCGGCACCCAAATGCTGGCCAAAGGCCACCATTTTCCTTAT
GTGACTCTAGTGGCGATTTTGGATATTGATGCCGGCCTGTTAAGTGTTGATATCCGGGCGCCAGAGCGGACTGCGCAGCT
GATTGTGCAGGTGGCCGGTCGTGCCGGCCGCGGTGAACATAAAGGCGATGTCTATTTACAGACCCTGCGTCCTGATCATC
CGCTGCTGAGCACCCTGGTCGAGCAGGATTATCGTGCCTTTGCCCGGCAAACCTTAAAAGAACGTCAGGCCGCCCTGCTG
CCCCCGTTTCGCTATACCGCCCTGATTCGCTGCGAATCCAAAAGTCAGGAGCAGAACCAGCAGTTTTTACAGCAACATGC
CCAGTGGCTGCGAGAAAATTCTGAACAGTTAATTGATATCTGGGGACCGATTCCGGCGCCAATGGAACGCAAGGCCGGCC
GCTATCAGGCGCATCTGGTGCTGTTGTCGCAAGATCGCGCCCGTTTACATTTTTATCTACGTGCATGGTGGCAAAATATG
TTGCATCACAAGCCATCAAATATGAAACTTAGCTTAGATATAGACCCTCAGGAATTCAGTTAA

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(207-369)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

73.315

100

0.735

Multiple sequence alignment