Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   MOW12_RS02500 Genome accession   NZ_CP094254
Coordinates   530932..531810 (+) Length   292 a.a.
NCBI ID   WP_005182159.1    Uniprot ID   N9KSY6
Organism   Acinetobacter indicus strain BDT2076     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 525932..536810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MOW12_RS02470 (MOW12_02470) wrbA 526741..527337 (+) 597 WP_127799005.1 NAD(P)H:quinone oxidoreductase -
  MOW12_RS02475 (MOW12_02475) - 527640..527822 (+) 183 WP_045796412.1 hypothetical protein -
  MOW12_RS02480 (MOW12_02480) - 527880..528260 (-) 381 WP_005182135.1 hypothetical protein -
  MOW12_RS02485 (MOW12_02485) - 528478..529053 (-) 576 WP_005182137.1 xanthine phosphoribosyltransferase -
  MOW12_RS02490 (MOW12_02490) - 529143..529856 (-) 714 WP_127799003.1 DUF3108 domain-containing protein -
  MOW12_RS02495 (MOW12_02495) - 530009..530692 (-) 684 WP_127799001.1 hypothetical protein -
  MOW12_RS02500 (MOW12_02500) tonB2 530932..531810 (+) 879 WP_005182159.1 TonB family protein Machinery gene
  MOW12_RS02505 (MOW12_02505) - 531807..532097 (-) 291 WP_016659563.1 hypothetical protein -
  MOW12_RS02510 (MOW12_02510) ybeY 532189..532671 (-) 483 WP_005182166.1 rRNA maturation RNase YbeY -
  MOW12_RS02515 (MOW12_02515) - 532691..533764 (-) 1074 WP_016659561.1 PhoH family protein -
  MOW12_RS02520 (MOW12_02520) miaB 533806..535260 (-) 1455 WP_005182171.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 292 a.a.        Molecular weight: 33024.72 Da        Isoelectric Point: 9.1867

>NTDB_id=668380 MOW12_RS02500 WP_005182159.1 530932..531810(+) (tonB2) [Acinetobacter indicus strain BDT2076]
MLKKFHFAPLTQQWWKDPLFGTVLTLAALSHLAVLTVQFVMPQQSDAAVKEIAVSLRPSATEIKDADFLAQADQQGSGTF
REAHRMSSDMPAPMIEQSAGDQQLESLERLQQQRELSFEEKVLMTTLSWQKQAAENQRKKALEELNSQFQAKAAMVASLE
AQYLQRQQNFSRQQKIKTVDGIQAKQDVAAGYLEKFRQKVEFYGNRYYPEAAKQQQLAGEVRLMVILNANGGIRAIRLIE
SSGHAMLDEAAKASVRKAAPFGAFDAKMKDISELRIIRTWRFDPAEAEFEVR

Nucleotide


Download         Length: 879 bp        

>NTDB_id=668380 MOW12_RS02500 WP_005182159.1 530932..531810(+) (tonB2) [Acinetobacter indicus strain BDT2076]
ATGTTAAAGAAATTTCATTTTGCACCTTTGACGCAGCAGTGGTGGAAAGATCCACTATTTGGCACCGTACTGACGCTGGC
GGCACTTTCGCATCTGGCTGTGTTAACGGTGCAATTTGTCATGCCACAGCAAAGCGATGCCGCGGTCAAGGAAATTGCAG
TCAGCTTAAGACCAAGTGCCACCGAAATTAAGGATGCCGACTTTTTAGCACAGGCCGACCAGCAGGGTTCTGGCACCTTC
CGGGAAGCGCACCGCATGTCCAGCGATATGCCCGCACCAATGATTGAACAGAGTGCCGGTGATCAGCAGCTGGAAAGTCT
TGAGCGTTTGCAGCAGCAGCGTGAACTGAGCTTTGAAGAAAAAGTGCTAATGACCACCTTAAGCTGGCAAAAGCAGGCGG
CGGAAAACCAGCGTAAAAAAGCGCTGGAAGAATTAAACAGCCAGTTTCAGGCCAAAGCGGCGATGGTGGCCAGTCTGGAA
GCGCAGTATTTACAGCGTCAGCAAAATTTCAGCCGTCAGCAGAAAATTAAAACCGTAGATGGAATTCAGGCCAAGCAGGA
TGTCGCAGCCGGTTATCTGGAAAAATTCCGTCAGAAAGTCGAATTTTATGGTAACCGTTATTATCCGGAAGCGGCCAAGC
AGCAACAGTTGGCCGGTGAGGTGCGTTTAATGGTGATTTTAAATGCCAACGGTGGGATTCGCGCGATTCGTTTAATTGAA
AGCTCGGGGCATGCCATGCTGGATGAAGCTGCCAAGGCTTCTGTGCGTAAAGCTGCTCCTTTTGGTGCCTTTGATGCCAA
GATGAAAGATATTTCCGAGCTACGCATTATCCGGACCTGGCGTTTTGACCCGGCTGAGGCGGAGTTTGAGGTGCGCTAG

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(205-282)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N9KSY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.344

95.548

0.729

Multiple sequence alignment