Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilA   Type   Machinery gene
Locus tag   MON37_RS11350 Genome accession   NZ_CP094242
Coordinates   2398912..2400363 (+) Length   483 a.a.
NCBI ID   WP_039408641.1    Uniprot ID   A0A0C1GYA3
Organism   Morococcus cerebrosus strain CIP 81.93     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2393912..2405363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON37_RS11330 (MON37_11330) bioH 2393978..2394724 (+) 747 WP_039404225.1 pimeloyl-ACP methyl ester esterase BioH -
  MON37_RS11335 (MON37_11335) - 2395046..2395834 (+) 789 WP_039404223.1 SAM-dependent methyltransferase -
  MON37_RS11340 (MON37_11340) - 2395876..2396853 (-) 978 WP_242883676.1 IS30 family transposase -
  MON37_RS11345 (MON37_11345) msrAB 2397198..2398766 (-) 1569 WP_039408639.1 bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB -
  MON37_RS11350 (MON37_11350) pilA 2398912..2400363 (+) 1452 WP_039408641.1 signal recognition particle-docking protein FtsY Machinery gene
  MON37_RS11360 (MON37_11360) - 2401350..2402036 (-) 687 WP_039408985.1 putative DNA-binding domain-containing protein -
  MON37_RS11365 (MON37_11365) - 2402026..2402868 (-) 843 WP_003755855.1 DUF692 family protein -
  MON37_RS11370 (MON37_11370) - 2402976..2403287 (-) 312 WP_003755853.1 hypothetical protein -
  MON37_RS11375 (MON37_11375) - 2403369..2403824 (-) 456 WP_039408982.1 DoxX family protein -

Sequence

Protein


Download         Length: 483 a.a.        Molecular weight: 51909.29 Da        Isoelectric Point: 4.4006

>NTDB_id=668366 MON37_RS11350 WP_039408641.1 2398912..2400363(+) (pilA) [Morococcus cerebrosus strain CIP 81.93]
MFSFFRRKKKQETPAQEETRIQETAAEAVERAEAGVSQTLETVQENIGEKAEELTAAVETAVESAKERAEEIRETVVEHV
SETVGHVREAVSETSSETVEQVEERVEAVSETVAENVSAAVEHVHEAVSDGSSETAEAVETVEIQAEAAPATSEEHSVAA
FENTAVATSSETSEPSETEPKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELETVLITSDMGMEATEYLMKD
VRNRVSLKGLKDGNELRDALKEALYDLIKPLEKPLVLPDTKEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGD
TFRAAAREQLQAWGERNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDA
PHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDA
LLD

Nucleotide


Download         Length: 1452 bp        

>NTDB_id=668366 MON37_RS11350 WP_039408641.1 2398912..2400363(+) (pilA) [Morococcus cerebrosus strain CIP 81.93]
ATGTTCAGCTTCTTCCGCCGCAAGAAAAAACAGGAAACGCCCGCTCAAGAAGAAACCCGCATTCAGGAAACCGCCGCCGA
AGCCGTAGAACGCGCCGAAGCAGGCGTTTCGCAAACGCTTGAAACGGTTCAGGAAAACATCGGCGAAAAAGCGGAAGAGC
TGACGGCGGCAGTCGAAACGGCGGTAGAAAGTGCAAAAGAGCGCGCCGAAGAAATCCGCGAGACTGTGGTTGAACATGTT
TCCGAAACGGTCGGACACGTCCGCGAGGCAGTCAGCGAAACGTCGTCTGAAACGGTCGAACAGGTGGAAGAGCGTGTTGA
AGCCGTCAGCGAAACCGTTGCCGAAAATGTTTCCGCAGCGGTAGAACACGTCCATGAAGCGGTCAGCGATGGGTCGTCTG
AAACCGCAGAAGCTGTCGAAACCGTAGAAATTCAAGCTGAAGCCGCGCCTGCAACATCCGAAGAACATTCCGTAGCAGCC
TTTGAAAATACAGCCGTCGCAACGTCGTCTGAAACCTCCGAACCGTCCGAAACCGAACCCAAACTCGGCTGGGCGGCGCG
TTTGAAACAGGGTTTGACCAAATCGCGCGATAAAATGGCGAAATCGTTGGCGGGCGTGTTCGGCGGCGGGCAAATCGACG
AAGACTTGTACGAAGAGCTGGAAACCGTGCTGATTACCAGCGACATGGGCATGGAAGCGACGGAATACCTGATGAAAGAC
GTGCGCAACCGCGTCAGCCTCAAGGGGCTGAAAGACGGCAACGAGTTGCGCGACGCATTGAAAGAAGCTTTGTACGACTT
GATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGACACGAAAGAGCCGTTCGTCATCATGTTGGCGGGCATCAACGGCG
CGGGTAAAACCACTTCCATCGGCAAACTCGCCAAATATTTCCAAGCTCAGGGCAAATCCGTGCTGCTTGCCGCAGGCGAC
ACCTTCCGCGCCGCAGCCCGCGAGCAGCTTCAGGCATGGGGCGAACGCAACAACGTTACCGTCATTTCGCAAACCACGGG
CGATTCCGCCGCCGTCTGCTTCGATGCCGTCCAAGCCGCCAAAGCGCGCGGCATCGACATCGTGCTGGCCGACACCGCCG
GCCGTCTGCCCACGCAGCTTCATTTGATGGAAGAAATCAAAAAAGTGAAGCGCGTGCTGCAAAAAGCGATGCCCGACGCG
CCGCACGAAATCATCGTCGTCCTCGATGCCAACATCGGGCAAAACGCTGTCAACCAAGTCAAAGCCTTTGACGATGCGCT
GGGGCTGACGGGGCTAATTGTGACCAAACTCGACGGTACGGCAAAAGGCGGCATCCTTGCCGCGCTTGCCTCCGACCGCC
CCGTCCCCGTCCGCTATATCGGCGTGGGCGAAGGCATAGACGATTTGCGCCCGTTTGACGCGCGCGCTTTTGTGGACGCG
TTGCTCGATTGA

Domains

Predicted by InterproScan.

SRP54-type protein, helical bundle domain (SRP54_N)

(198-264)

SRP54-type protein, GTPase domain (SRP54)

(283-482)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C1GYA3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilA Neisseria gonorrhoeae MS11

74.534

100

0.745

Multiple sequence alignment