Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Machinery gene
Locus tag   MON37_RS05495 Genome accession   NZ_CP094242
Coordinates   1202140..1204365 (-) Length   741 a.a.
NCBI ID   WP_039405820.1    Uniprot ID   -
Organism   Morococcus cerebrosus strain CIP 81.93     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context

Location: 1197140..1209365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON37_RS05480 (MON37_05480) - 1198762..1199448 (+) 687 WP_122975392.1 peptidoglycan DD-metalloendopeptidase family protein -
  MON37_RS05485 (MON37_05485) tig 1199778..1201088 (+) 1311 WP_039405825.1 trigger factor -
  MON37_RS05490 (MON37_05490) clpP 1201176..1201796 (+) 621 WP_003742152.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP -
  MON37_RS05495 (MON37_05495) comA 1202140..1204365 (-) 2226 WP_039405820.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  MON37_RS05500 (MON37_05500) gshA 1204516..1205868 (-) 1353 WP_039405818.1 glutamate--cysteine ligase -
  MON37_RS05505 (MON37_05505) leuC 1206136..1207545 (+) 1410 WP_039405814.1 3-isopropylmalate dehydratase large subunit -
  MON37_RS05510 (MON37_05510) - 1207642..1207863 (+) 222 WP_029609583.1 hypothetical protein -
  MON37_RS05515 (MON37_05515) - 1208080..1208217 (+) 138 WP_003742168.1 entericidin A/B family lipoprotein -
  MON37_RS05520 (MON37_05520) - 1208250..1208387 (+) 138 WP_009311431.1 lipoprotein -
  MON37_RS05525 (MON37_05525) leuD 1208464..1209105 (+) 642 WP_003742170.1 3-isopropylmalate dehydratase small subunit -

Sequence

Protein


Download         Length: 741 a.a.        Molecular weight: 80062.85 Da        Isoelectric Point: 9.5422

>NTDB_id=668348 MON37_RS05495 WP_039405820.1 1202140..1204365(-) (comA) [Morococcus cerebrosus strain CIP 81.93]
MLKYYGLPFWAVGVIASFALPSVPHWGVWLAAALVLLAASRRFAAAGMMLCVLLGAAYGVFRTEAALSAQWPLNGSSESV
LTVEVADMPRGDGRRVQFAAKAWTEDGRQFDLLLSDYQKRDWAVGSRWKVSARLKPVIGEVNLRGPNREAWALANGLDGA
GTLGKGRSLVREGGGVGLAVWRDAVSRRWQAVGAGSLDFSDGIGLMRALSIGEQSALRPELWQAFRPLGLTHLVSISGLH
VTMVAVLAGWLVKLIFRRLPWIPAKPRVWILAGGAAGALFYALLAGFSVPTQRSVLMLAAFAWAWWRGSLSSGWTAWWQA
LAVVLLLDPLAVLGVGTWLSFGLVAALIWASAGRLKERGWRLAVRGQWAATVLSVVLLGYIFASLPIISPLVNAAMIPWF
SWVLTPLALLGSVLPFAPLQWAAAGLAEYTLRGLVWLAEVSPEFAVAAAPMPLLVLAFTAALLWLLPRGLGLRPWACLVL
AGFVFYRPDRLDDGLARITVMDAGQGLSVLVQTRDRNLLFDTGTAQAAQTGIVPSLNAMGVRRLDKLILSHHDSDHDGGL
DAVSDIEIGETLAGQPEFYPNAKFCAEAQWQWDGVDFELLRSSENPVGEDNDRSCVLRIVSDGQALLVTGDLGVKGEAGL
VERYGSSLYSQVLILGHHGSNTASSGGFLNTVAPKYAVASSGYANAYKHPTPAVQTRVRAHGATLLRTDLSGALVFELDG
DEIFKGRLKKDKFYWQKKPFE

Nucleotide


Download         Length: 2226 bp        

>NTDB_id=668348 MON37_RS05495 WP_039405820.1 1202140..1204365(-) (comA) [Morococcus cerebrosus strain CIP 81.93]
TTGCTGAAATATTATGGATTGCCGTTTTGGGCAGTCGGCGTCATTGCCTCGTTCGCTTTGCCGTCCGTACCGCATTGGGG
TGTGTGGCTGGCGGCGGCATTGGTTTTGCTGGCGGCTTCGCGGCGGTTTGCAGCAGCGGGCATGATGCTGTGCGTCCTGC
TCGGCGCGGCTTACGGCGTGTTTCGGACGGAAGCGGCTTTGTCGGCGCAATGGCCGCTGAACGGGTCTTCGGAGTCGGTG
TTGACGGTTGAAGTCGCGGATATGCCGCGCGGCGACGGGCGGCGGGTGCAGTTTGCGGCGAAGGCGTGGACAGAGGATGG
GCGGCAGTTTGATTTATTGCTGTCGGATTATCAGAAACGCGATTGGGCGGTGGGCAGCCGCTGGAAAGTGTCGGCACGGC
TCAAGCCGGTTATCGGCGAAGTGAACCTGCGCGGGCCGAACCGCGAGGCTTGGGCGTTGGCAAACGGTTTGGATGGTGCG
GGTACGCTGGGCAAAGGCAGGAGCTTGGTTCGCGAGGGCGGCGGTGTCGGCTTGGCGGTGTGGCGCGATGCAGTCAGCCG
CCGTTGGCAGGCTGTCGGGGCGGGAAGTCTGGATTTTTCGGACGGTATCGGTCTGATGCGGGCTTTGAGCATAGGCGAAC
AATCGGCGTTGAGGCCCGAACTGTGGCAGGCGTTCCGACCTTTGGGTTTGACGCACTTGGTCAGTATTTCGGGGCTGCAC
GTTACGATGGTGGCGGTGTTGGCGGGTTGGCTGGTCAAACTGATTTTCAGACGACTGCCTTGGATACCGGCAAAACCGCG
CGTGTGGATTTTGGCGGGCGGCGCGGCAGGGGCTTTGTTTTATGCACTGCTGGCGGGCTTTTCCGTGCCGACGCAGCGAA
GCGTCTTGATGTTGGCGGCGTTTGCCTGGGCTTGGTGGCGCGGCAGTCTGTCTTCGGGTTGGACGGCGTGGTGGCAGGCT
TTGGCGGTGGTGTTGCTGCTCGATCCATTGGCGGTTTTGGGCGTGGGTACTTGGCTGTCGTTCGGCTTGGTTGCCGCCTT
GATTTGGGCTTCGGCAGGTCGTCTGAAAGAACGCGGCTGGCGTTTGGCTGTACGCGGACAATGGGCGGCGACGGTGTTGT
CGGTGGTATTGTTGGGCTATATTTTTGCGTCGTTGCCCATCATCAGCCCTTTGGTCAATGCGGCGATGATTCCTTGGTTT
TCTTGGGTGCTGACGCCTTTGGCGCTGCTGGGGTCGGTGTTGCCGTTCGCACCTTTGCAATGGGCGGCGGCAGGTTTGGC
TGAATACACTTTGCGCGGCTTGGTTTGGCTGGCGGAGGTGTCGCCTGAATTTGCCGTAGCCGCCGCGCCTATGCCGCTGT
TGGTTTTGGCTTTTACGGCGGCTTTGCTGTGGCTGTTGCCGCGCGGACTGGGATTGCGACCGTGGGCGTGTTTGGTGTTG
GCTGGATTTGTGTTTTACCGCCCCGACCGTTTGGATGACGGATTAGCGCGGATTACCGTAATGGATGCGGGACAGGGTTT
GTCGGTGTTGGTACAAACGCGCGACCGCAACCTGCTGTTTGACACGGGTACGGCGCAGGCGGCGCAAACGGGTATCGTGC
CAAGTCTGAACGCCATGGGCGTGCGCCGTTTGGACAAGCTGATTCTGTCGCATCACGACAGCGACCACGACGGCGGTTTG
GACGCCGTTTCCGATATTGAAATCGGCGAAACGCTGGCGGGACAACCTGAGTTTTATCCGAACGCAAAATTTTGCGCCGA
AGCGCAATGGCAATGGGACGGCGTGGATTTCGAGTTATTGAGGTCGTCTGAAAACCCGGTCGGTGAAGACAATGACCGAA
GCTGCGTCTTGCGCATCGTTTCCGACGGGCAGGCATTGCTGGTTACGGGCGATTTGGGCGTCAAAGGCGAAGCGGGGCTG
GTAGAACGCTACGGCAGCTCTCTGTACAGCCAGGTTTTGATATTGGGACACCACGGCAGCAATACGGCTTCATCCGGCGG
TTTCCTCAACACGGTCGCACCCAAATACGCCGTCGCTTCCAGCGGCTACGCCAATGCCTATAAACACCCCACGCCCGCCG
TCCAAACCCGCGTCCGCGCACACGGCGCGACTTTGTTGCGGACGGATTTGTCGGGCGCGCTGGTGTTTGAATTGGACGGC
GATGAAATCTTTAAAGGTCGTCTGAAAAAGGATAAGTTTTATTGGCAGAAAAAGCCGTTTGAGTAA

Domains

Predicted by InterproScan.

Competence protein (Competence)

(209-466)

Metallo-beta-lactamase superfamily (Lactamase_B)

(503-664)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Neisseria gonorrhoeae MS11

72.2

100

0.722

Multiple sequence alignment