Detailed information    

insolico Bioinformatically predicted

Overview


Name   tpc   Type   Machinery gene
Locus tag   MON37_RS02650 Genome accession   NZ_CP094242
Coordinates   581565..582785 (+) Length   406 a.a.
NCBI ID   WP_039406535.1    Uniprot ID   A0A0C1EL81
Organism   Morococcus cerebrosus strain CIP 81.93     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context


Location: 576565..587785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON37_RS02625 (MON37_02625) rsmA 577699..578478 (+) 780 WP_016687675.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  MON37_RS02630 (MON37_02630) - 578496..579224 (+) 729 WP_003740819.1 amino acid ABC transporter ATP-binding protein -
  MON37_RS02635 (MON37_02635) - 579347..579706 (+) 360 WP_039406524.1 hypothetical protein -
  MON37_RS02640 (MON37_02640) - 579711..580145 (+) 435 WP_039406527.1 protein YgfX -
  MON37_RS02645 (MON37_02645) folC 580278..581552 (+) 1275 WP_039406530.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  MON37_RS02650 (MON37_02650) tpc 581565..582785 (+) 1221 WP_039406535.1 SPOR domain-containing protein Machinery gene
  MON37_RS02655 (MON37_02655) - 582778..583284 (+) 507 WP_039406537.1 CvpA family protein -
  MON37_RS02660 (MON37_02660) rplS 583611..583976 (-) 366 WP_003679470.1 50S ribosomal protein L19 -
  MON37_RS02665 (MON37_02665) trmD 583990..584739 (-) 750 WP_039406548.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD -
  MON37_RS02670 (MON37_02670) rimM 584739..585248 (-) 510 WP_039406550.1 ribosome maturation factor RimM -
  MON37_RS02675 (MON37_02675) rpsP 585267..585515 (-) 249 WP_003740833.1 30S ribosomal protein S16 -

Sequence


Protein


Download         Length: 406 a.a.        Molecular weight: 43744.92 Da        Isoelectric Point: 9.7653

>NTDB_id=668339 MON37_RS02650 WP_039406535.1 581565..582785(+) (tpc) [Morococcus cerebrosus strain CIP 81.93]
MSDNKQNEVLTGYEQLKRRNRRRLVMASGLVAASTVLLGVALSTGPENKPEENAQTTTIQQNNANAEPANLADATVLEPS
TKEDLEAAAEAAKNADAEVADKPQETAAPEQTAQAEPQPDAPPAAPEDVGPPLVLINDTLSDSDIKGLEESEKIQKAEAA
KREAAERRAEERRRNREEQRKAQQLQAQEAAEREANAAARKRALQAAKAEKAERAAAAERNKLAQLEKAEKAVAERKALK
AKEEAAAKHKAAAEKAKETVTASASEPKERIRVDASKYEKIETAGKKASAVREAEAKVAKAKAEQTAKAEKTATAERSSE
KAKTKTAEVKSGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEVMTDKGKVYRVKSGAYKNAYDAERDLNKLRVHGIA
GQVTNE

Nucleotide


Download         Length: 1221 bp        

>NTDB_id=668339 MON37_RS02650 WP_039406535.1 581565..582785(+) (tpc) [Morococcus cerebrosus strain CIP 81.93]
ATGTCTGACAATAAGCAAAATGAAGTTCTGACCGGTTACGAACAGCTCAAACGCCGCAACCGCCGCCGCTTGGTTATGGC
ATCGGGGTTGGTGGCGGCATCGACCGTTTTATTGGGCGTCGCCCTGTCAACCGGACCGGAAAACAAGCCAGAAGAAAACG
CCCAAACTACAACCATCCAACAAAACAACGCCAACGCAGAACCTGCCAACTTGGCGGATGCGACCGTGTTGGAGCCTTCT
ACCAAAGAAGATTTGGAAGCAGCGGCAGAAGCGGCTAAAAATGCCGATGCCGAAGTAGCGGACAAACCGCAGGAAACCGC
CGCGCCGGAGCAAACTGCGCAAGCCGAGCCGCAACCTGATGCGCCGCCAGCCGCGCCCGAAGATGTAGGCCCGCCTTTGG
TGCTGATTAACGATACGCTGTCAGACAGCGACATCAAAGGTTTGGAAGAGTCTGAGAAAATCCAAAAAGCCGAAGCCGCC
AAACGCGAAGCAGCCGAGCGACGCGCGGAAGAGCGCCGCCGTAATCGTGAAGAACAGCGTAAAGCGCAGCAGCTTCAAGC
CCAAGAAGCAGCGGAACGCGAAGCCAATGCCGCAGCGCGTAAACGTGCGCTTCAAGCTGCCAAAGCCGAGAAGGCCGAGC
GTGCCGCCGCAGCCGAGCGCAACAAGCTGGCGCAGTTGGAAAAAGCCGAGAAAGCCGTTGCCGAACGTAAGGCGTTAAAA
GCCAAAGAAGAAGCGGCGGCAAAACACAAAGCGGCAGCGGAAAAAGCCAAAGAAACCGTCACAGCATCCGCATCCGAACC
TAAAGAAAGAATTCGGGTAGATGCCTCCAAATATGAAAAAATCGAAACAGCCGGCAAAAAAGCTTCCGCAGTAAGGGAAG
CCGAAGCGAAAGTTGCCAAAGCCAAAGCCGAGCAGACGGCCAAGGCAGAGAAAACCGCTACTGCCGAAAGGTCGTCTGAA
AAGGCAAAAACCAAAACCGCCGAAGTCAAATCAGGTAAAAAAGCCGCCATTCAGGCAGGTTATGCTGAAAAAGAACGCGC
CTTGAGCCTGCAACGCAAAATGAAAGCAGCAGGTATCGACTCAACCATTACCGAAGTGATGACGGATAAAGGCAAGGTTT
ACCGCGTCAAATCGGGCGCATACAAAAACGCCTACGACGCCGAACGCGACTTGAACAAACTGCGCGTACACGGCATTGCC
GGACAGGTAACCAATGAATGA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0C1EL81

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

49.755

100

0.5


Multiple sequence alignment