Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   MON40_RS09715 Genome accession   NZ_CP094241
Coordinates   2022846..2023316 (+) Length   156 a.a.
NCBI ID   WP_036491550.1    Uniprot ID   -
Organism   Neisseria macacae ATCC 33926     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2017846..2028316
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON40_RS09690 (MON40_09690) - 2017881..2018345 (-) 465 WP_003777487.1 ProQ/FINO family protein -
  MON40_RS09695 (MON40_09695) aroC 2018583..2019674 (-) 1092 WP_003777483.1 chorismate synthase -
  MON40_RS09700 (MON40_09700) - 2019778..2020548 (-) 771 WP_003741042.1 TSUP family transporter -
  MON40_RS13385 - 2020559..2020687 (+) 129 WP_003777481.1 hypothetical protein -
  MON40_RS09705 (MON40_09705) - 2020974..2021438 (+) 465 WP_003764370.1 Lrp/AsnC ligand binding domain-containing protein -
  MON40_RS09710 (MON40_09710) - 2021936..2022646 (+) 711 WP_003777473.1 phosphoglycolate phosphatase -
  MON40_RS09715 (MON40_09715) recX 2022846..2023316 (+) 471 WP_036491550.1 recombination regulator RecX Regulator
  MON40_RS09720 (MON40_09720) - 2023391..2023552 (+) 162 WP_009311625.1 hypothetical protein -
  MON40_RS09725 (MON40_09725) - 2023747..2024349 (-) 603 WP_039862916.1 DUF4112 domain-containing protein -
  MON40_RS09730 (MON40_09730) - 2024559..2025689 (-) 1131 WP_039862863.1 DUF6396 domain-containing protein -
  MON40_RS09735 (MON40_09735) - 2025861..2026991 (-) 1131 WP_039862862.1 DUF6396 domain-containing protein -
  MON40_RS09740 (MON40_09740) - 2027161..2028270 (-) 1110 WP_003777465.1 DUF6396 domain-containing protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17950.22 Da        Isoelectric Point: 9.2559

>NTDB_id=668317 MON40_RS09715 WP_036491550.1 2022846..2023316(+) (recX) [Neisseria macacae ATCC 33926]
MKPQKSLRARAMDILSRQEISRVGLKRKLAPYAESEEELENVLDEFAGRNWQSDQRYAEAYIHSKSRQHGSLRLKQALAQ
QGIDETVSREFMPDKASELQTAVAVLRKKFKQPAADLKDKQKQARFLAYRGFDMDTIHAALKSSWDGDDVFEYGEN

Nucleotide


Download         Length: 471 bp        

>NTDB_id=668317 MON40_RS09715 WP_036491550.1 2022846..2023316(+) (recX) [Neisseria macacae ATCC 33926]
ATGAAACCCCAAAAATCCCTGCGCGCCCGCGCGATGGACATTCTTTCCCGACAGGAAATCAGCCGCGTCGGACTTAAGCG
CAAGCTCGCCCCGTATGCCGAAAGCGAAGAAGAATTGGAAAACGTGTTGGATGAATTTGCCGGACGCAACTGGCAATCCG
ACCAACGCTACGCCGAAGCCTACATCCACAGCAAAAGCCGCCAACACGGTTCCCTGCGTCTGAAACAGGCATTGGCGCAG
CAAGGCATAGACGAAACCGTCAGCCGCGAATTCATGCCCGACAAAGCGAGCGAACTGCAAACCGCAGTCGCCGTGCTGCG
CAAAAAATTCAAACAGCCTGCCGCCGATTTGAAAGACAAGCAAAAACAAGCGCGGTTTCTCGCCTATCGCGGCTTCGATA
TGGACACCATCCACGCCGCGCTCAAAAGCAGTTGGGACGGAGACGATGTTTTTGAATACGGAGAAAATTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

81.507

93.59

0.763

Multiple sequence alignment