Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   MON40_RS02285 Genome accession   NZ_CP094241
Coordinates   486137..488179 (+) Length   680 a.a.
NCBI ID   WP_147612000.1    Uniprot ID   -
Organism   Neisseria macacae ATCC 33926     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Genomic island 481756..492793 486137..488179 within 0


Gene organization within MGE regions


Location: 481756..492793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON40_RS02265 (MON40_02265) - 481756..482055 (+) 300 WP_003766302.1 membrane protein -
  MON40_RS02270 (MON40_02270) - 482239..484512 (-) 2274 WP_003780263.1 Tex family protein -
  MON40_RS02275 (MON40_02275) - 484626..485147 (-) 522 WP_003780261.1 hypothetical protein -
  MON40_RS02280 (MON40_02280) - 485303..486007 (-) 705 WP_003780258.1 SMI1/KNR4 family protein -
  MON40_RS02285 (MON40_02285) recG 486137..488179 (+) 2043 WP_147612000.1 ATP-dependent DNA helicase RecG Machinery gene
  MON40_RS02290 (MON40_02290) - 488487..489902 (-) 1416 WP_003780255.1 DEAD/DEAH box helicase -
  MON40_RS02295 (MON40_02295) - 490362..490610 (+) 249 WP_003757173.1 hypothetical protein -
  MON40_RS02300 (MON40_02300) - 490796..491437 (-) 642 WP_050797974.1 GrxB family glutaredoxin -
  MON40_RS02305 (MON40_02305) - 491544..492005 (-) 462 WP_003780247.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 75220.09 Da        Isoelectric Point: 6.9539

>NTDB_id=668295 MON40_RS02285 WP_147612000.1 486137..488179(+) (recG) [Neisseria macacae ATCC 33926]
MMTPETQKQLKITDVSAKKLDKLNLNTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQMAVGKRIRAVGEIKHGFYGDEMIHPKIRDAESSGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLGRLKLPHLAESLRLLHSPPPSFTIHQLSDGALPAWQRLKFDELLAQQLSMRLARQKRVSGTA
AALGGDGTLTQALRHALPFALTDAQERVVSEIRRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQAAVMAPTEI
LAEQHFIKFKQWLEPLGLEVVWLSGSQRKKAKDEAKAKLADGTVKIAVGTHALFSDDVEFQNLGLVIVDEQHRFGVAQRL
ALKNKGRDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNIRRTEVEGFVLNICRKGQQAYWVCPLI
EESETLQLQTATETLEQLQAALPELNIGLVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHSERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEE
DLHLLEQAREIAPMLIEQNPEIVEAHLARWLVSREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=668295 MON40_RS02285 WP_147612000.1 486137..488179(+) (recG) [Neisseria macacae ATCC 33926]
ATGATGACGCCCGAAACCCAGAAACAGCTCAAAATTACCGACGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCAACAC
CGCATGGGATTTGGTGTTGCATCTGCCGCTGCGTTACGAGGACGAGACGCACATCATGCCGATTAAGGATGCGCCGATCG
GCGTGCCGTGTCAGGTCGAGGGTGAAGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGCTGATTGTCCAAATC
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGTTTCATACACTTTTACGCCAGCCATCAGAAGCAGATGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGGTTTTACGGCGACGAGATGATTCATCCTAAAATCCGCGATGCCGAGA
GCAGCGGTTTGGCGGAAAGCCTCACGCCCGTCTATCCGACTGTAAACGGCTTGAACCAGCCCACTTTGCGCCGCATCATC
CAGACGGCGTTGGATGTTACGCCGCTGCACGACACGCTGCCCGATGCCTTATTGGGCCGTCTGAAACTGCCGCACCTCGC
CGAAAGCCTGCGCCTTTTGCATTCGCCGCCGCCGAGTTTCACCATCCACCAGCTTTCCGACGGCGCGCTGCCTGCATGGC
AGCGGCTCAAATTCGACGAACTTTTGGCGCAACAGCTTTCCATGCGGCTGGCGCGGCAGAAGCGCGTCAGCGGCACGGCG
GCGGCATTGGGCGGCGACGGCACGTTGACCCAAGCCCTGCGCCACGCCCTGCCGTTTGCCCTGACCGATGCGCAAGAAAG
GGTCGTGTCCGAAATCCGCCGCGACATGGCGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGATGTTGGCAGCGGCA
AAACCATCGTCGCCGCCTTGTCCGCGCTGACCGCCATCGAATCCGGCGCGCAGGCGGCCGTGATGGCGCCGACCGAAATC
CTTGCCGAACAGCATTTCATCAAGTTCAAACAATGGCTCGAACCTTTAGGACTCGAAGTCGTCTGGCTCTCCGGCAGCCA
GCGCAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTCGCCGACGGCACCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGACGTCGAGTTTCAAAATCTGGGCTTGGTGATTGTGGACGAACAACACCGCTTCGGCGTCGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGACGTCCATCAGTTAATGATGTCCGCCACGCCCATCCCGCGCACGCTCGCCATGAGTTT
TTTCGCCGACTTGGACGTGTCCGTCATCGACGAATTGCCGCCCGGGCGCACCCCGATTAAAACCCGCCTCGTCAACAATA
TCCGCCGCACCGAAGTCGAAGGCTTCGTCCTCAACATCTGCCGCAAAGGGCAGCAGGCATACTGGGTCTGCCCGCTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACAGCTACCGAAACCCTCGAGCAGCTTCAGGCGGCATTGCCCGAACTCAACAT
CGGCTTGGTACACGGGCGCATGAAAGCCGCCGAAAAAGCCGAAGTCATGGCGGAGTTTGCCGCAGGCCGTCTGAACGTCT
TGGTTGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTGATCGAACACTCCGAACGCATG
GGCTTGGCGCAGCTTCACCAATTACGCGGGCGGGTAGGGCGCGGCGCGGCAGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCTTTGAGCGAACTCGCTAAAGCTCGGCTGAAAGTCATCTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACC
TCAACATACGCGGCCCCGGCGAATTTCTCGGTGCGCGCCAAAGCGGCGTCCCCATGCTGCGCTTCGCCAATCTTGAAGAA
GACCTACACCTCTTGGAACAAGCGCGCGAAATCGCCCCAATGCTGATTGAACAAAACCCCGAAATCGTCGAAGCGCATCT
GGCAAGGTGGCTTGTCAGCAGGGAAGGATATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(262-419)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

93.529

100

0.935

Multiple sequence alignment