Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OIC96_RS20590 Genome accession   NZ_CP108938
Coordinates   4623265..4624389 (+) Length   374 a.a.
NCBI ID   WP_330306439.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00775     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4618265..4629389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIC96_RS20575 (OIC96_20585) - 4618888..4619748 (+) 861 WP_330306441.1 hypothetical protein -
  OIC96_RS20580 (OIC96_20590) - 4619812..4621590 (-) 1779 WP_330306440.1 hypothetical protein -
  OIC96_RS20585 (OIC96_20595) radA/sms 4621787..4623196 (+) 1410 WP_327430649.1 DNA repair protein RadA Machinery gene
  OIC96_RS20590 (OIC96_20600) disA 4623265..4624389 (+) 1125 WP_330306439.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OIC96_RS20595 (OIC96_20605) - 4624576..4625385 (-) 810 WP_330306438.1 hypothetical protein -
  OIC96_RS20600 (OIC96_20610) - 4625699..4626607 (+) 909 WP_330306437.1 A/G-specific adenine glycosylase -
  OIC96_RS20605 (OIC96_20615) - 4626906..4627457 (+) 552 WP_327430645.1 SigE family RNA polymerase sigma factor -
  OIC96_RS20610 (OIC96_20620) - 4627445..4628092 (+) 648 WP_330306436.1 hypothetical protein -
  OIC96_RS20615 (OIC96_20625) cseB 4628112..4628819 (+) 708 WP_330306435.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40154.91 Da        Isoelectric Point: 4.9269

>NTDB_id=668282 OIC96_RS20590 WP_330306439.1 4623265..4624389(+) (disA) [Streptomyces sp. NBC_00775]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVSFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELDALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=668282 OIC96_RS20590 WP_330306439.1 4623265..4624389(+) (disA) [Streptomyces sp. NBC_00775]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAATCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCAGGCACAGCCCTGCGCGACGGGCTCGAGCGTATTCTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACCGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATCCTGCGCGCGGGCGTGCAGCTGGTGCC
CGACCCCACGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCAGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAACTCCGCCTCGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTCGTCACCGTCCGCGACGTCTCGGCTGTCGCCCAGCGCCTGGAGATGGTGCGGCGCATCG
CCACCGAGATCGCCGAGTACGTAGTCGAACTGGGCACCGACGGGCGTCTTCTCGCCCTCCAGCTGGACGAGTTGATCGCC
GGCGTCGAGCCCGAGCGCGAACTCGTCGTACGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTCTCCGAGCTGGACGCGCTCAGCCACGCGGAGCTCCTCGAACTCTCCACCGTGGCACGGGCGCTGGGCTACACCG
GCTCCCCCGAGGCGCTGGACTCCGCCGTCTCCCCGCGCGGCTTCCGCCTCCTCGCCAAGGTGCCGCGCCTGCCCGGCGCG
ATCATCGACCGCCTTGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCCGCCAGCGTGGACGACCTGCAGGCGGTCGA
CGGGGTGGGCGAGGCGCGGGCGCGCAGTGTCCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATTCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436


Multiple sequence alignment