Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OIC96_RS12615 Genome accession   NZ_CP108938
Coordinates   2828799..2829575 (+) Length   258 a.a.
NCBI ID   WP_189188217.1    Uniprot ID   A0A918D5P5
Organism   Streptomyces sp. NBC_00775     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2823799..2834575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIC96_RS12605 (OIC96_12620) - 2824672..2827575 (-) 2904 WP_330307736.1 vitamin B12-dependent ribonucleotide reductase -
  OIC96_RS12610 (OIC96_12625) nrdR 2827726..2828280 (-) 555 WP_330307735.1 transcriptional regulator NrdR -
  OIC96_RS12615 (OIC96_12630) dinR/lexA 2828799..2829575 (+) 777 WP_189188217.1 transcriptional repressor LexA Regulator
  OIC96_RS12620 (OIC96_12635) - 2830211..2832187 (-) 1977 WP_330307734.1 ATP-dependent DNA helicase -
  OIC96_RS12625 (OIC96_12640) - 2832276..2834144 (-) 1869 WP_330310314.1 IucA/IucC family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 27977.71 Da        Isoelectric Point: 7.4755

>NTDB_id=668258 OIC96_RS12615 WP_189188217.1 2828799..2829575(+) (dinR/lexA) [Streptomyces sp. NBC_00775]
MTTTADSATITAQDRSQGRLEPVHAMNEAVNHEGPKRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQSSVQPTDTAGKPAASYVPLVGRIAAGGPILAEESVEDV
FPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNSAYQPI
PGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 777 bp        

>NTDB_id=668258 OIC96_RS12615 WP_189188217.1 2828799..2829575(+) (dinR/lexA) [Streptomyces sp. NBC_00775]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCGATGAA
CGAAGCCGTGAATCATGAGGGACCCAAGCGCTCCCTGCCAGGCCGACCTCCAGGCATCCGCGCGGACAGCTCGGGGCTCA
CAGACCGGCAGCGCCGGGTGATCGAGGTCATCAGGGACTCCGTACAGCGGCGCGGCTACCCGCCGTCGATGCGGGAGATC
GGGCAGGCGGTCGGCCTGTCCAGCACCTCCTCGGTCGCGCATCAGCTGATGGCATTGGAGCGCAAGGGCTTTCTGCGCCG
CGACCCGCACCGCCCGCGTGCGTACGAGGTCCGGGGCTCCGACCAGTCCTCGGTCCAGCCCACCGACACGGCGGGCAAGC
CGGCCGCGTCGTACGTGCCGCTCGTCGGCCGTATCGCGGCCGGTGGCCCGATCCTCGCCGAGGAGTCGGTCGAGGACGTC
TTCCCCCTCCCGCGCCAGCTGGTCGGTGACGGCGAGCTGTTCGTCCTGAAGGTCGTCGGTGACTCGATGATCGAGGCCGC
CATCTGCGACGGGGACTGGGTGACGGTCCGCCGCCAGCCGGTCGCGGAGAACGGCGACATCGTGGCCGCGATGCTGGACG
GCGAGGCCACGGTGAAGCGCTTCAAGCGCGAGGACGGGCACGTGTGGCTGCTGCCGCACAACTCCGCGTACCAGCCGATT
CCCGGCGACGAGGCGACCATCCTCGGCAAGGTCGTGGCAGTGCTGCGGCGGGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(140-252)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A918D5P5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

45.714

81.395

0.372

Multiple sequence alignment