Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MP576_RS05325 Genome accession   NZ_CP094239
Coordinates   1143231..1143635 (+) Length   134 a.a.
NCBI ID   WP_003071158.1    Uniprot ID   A0A5S4T294
Organism   Comamonas sp. 7D-2evo1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1138231..1148635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP576_RS05305 (MP576_05305) - 1138721..1140493 (-) 1773 WP_034354011.1 alkaline phosphatase -
  MP576_RS05310 (MP576_05310) hemL 1140656..1141960 (-) 1305 WP_034353945.1 glutamate-1-semialdehyde 2,1-aminomutase -
  MP576_RS05315 (MP576_05315) - 1141944..1142912 (-) 969 WP_012839730.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  MP576_RS05320 (MP576_05320) - 1143028..1143180 (+) 153 WP_034399566.1 rubredoxin -
  MP576_RS05325 (MP576_05325) pilG 1143231..1143635 (+) 405 WP_003071158.1 PleD family two-component system response regulator Regulator
  MP576_RS05330 (MP576_05330) - 1143635..1143997 (+) 363 WP_003071159.1 PleD family two-component system response regulator -
  MP576_RS05335 (MP576_05335) - 1144013..1144540 (+) 528 WP_034353942.1 chemotaxis protein CheW -
  MP576_RS05340 (MP576_05340) - 1144560..1146803 (+) 2244 WP_034353939.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14667.90 Da        Isoelectric Point: 6.9230

>NTDB_id=668258 MP576_RS05325 WP_003071158.1 1143231..1143635(+) (pilG) [Comamonas sp. 7D-2evo1]
MTASGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
NTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVQQFALQAADVGAA

Nucleotide


Download         Length: 405 bp        

>NTDB_id=668258 MP576_RS05325 WP_003071158.1 1143231..1143635(+) (pilG) [Comamonas sp. 7D-2evo1]
GTGACAGCATCTGGTGCGCCTTTGCGCGTTCTGGTCGTGGATGACAGCAACACCATCCGCCGCAGCGCTGAAATTTTCCT
CAAGCAAGGTGGTCACGAAGTTCTTCTTGCCGACGATGGCTTCGATGCCCTGTCCAAGGTCAATGACTACCAGCCCCAGC
TCATCTTCTGCGACATTCTGATGCCCAAACTCGATGGCTATCAGACCTGCGCCATCATCAAGCGCAATGCTCGCTTTGCC
AATACGCCCGTCGTGATGCTGTCATCCAAGGACGGTGTATTCGACAAGGCTCGCGGTCGCATGGTGGGCTGCCAGGACTA
TCTGACCAAACCGTTTACCAAAGATCAATTGCTGCAAGCCGTACAACAATTCGCGCTGCAAGCTGCAGATGTGGGAGCTG
CATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5S4T294

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.621

86.567

0.507

Multiple sequence alignment