Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | MP387_RS06280 | Genome accession | NZ_CP094226 |
| Coordinates | 1284598..1286856 (+) | Length | 752 a.a. |
| NCBI ID | WP_242745804.1 | Uniprot ID | - |
| Organism | Streptococcus oralis strain 1648 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1279598..1291856
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MP387_RS06250 (MP387_06250) | - | 1280383..1281156 (-) | 774 | WP_242745801.1 | HAD hydrolase family protein | - |
| MP387_RS06255 (MP387_06255) | - | 1281161..1282018 (-) | 858 | WP_242745802.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | - |
| MP387_RS06260 (MP387_06260) | - | 1282167..1282487 (-) | 321 | WP_242745803.1 | TfoX/Sxy family protein | - |
| MP387_RS06265 (MP387_06265) | - | 1282521..1283255 (-) | 735 | WP_000140925.1 | amino acid ABC transporter ATP-binding protein | - |
| MP387_RS06270 (MP387_06270) | - | 1283255..1283938 (-) | 684 | WP_001011622.1 | amino acid ABC transporter permease | - |
| MP387_RS06275 (MP387_06275) | - | 1284130..1284360 (+) | 231 | WP_000443577.1 | DUF1797 family protein | - |
| MP387_RS06280 (MP387_06280) | clpE | 1284598..1286856 (+) | 2259 | WP_242745804.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| MP387_RS06285 (MP387_06285) | - | 1286899..1287513 (-) | 615 | WP_242745805.1 | GyrI-like domain-containing protein | - |
| MP387_RS06290 (MP387_06290) | - | 1287568..1288470 (-) | 903 | WP_242745806.1 | YafY family protein | - |
| MP387_RS06295 (MP387_06295) | - | 1288647..1289099 (+) | 453 | WP_242745807.1 | NUDIX hydrolase | - |
| MP387_RS06300 (MP387_06300) | - | 1289158..1289457 (+) | 300 | WP_000767206.1 | DUF1827 family protein | - |
| MP387_RS06305 (MP387_06305) | metK | 1289528..1290718 (-) | 1191 | WP_049478314.1 | methionine adenosyltransferase | - |
Sequence
Protein
Download Length: 752 a.a. Molecular weight: 83865.29 Da Isoelectric Point: 5.0749
>NTDB_id=668113 MP387_RS06280 WP_242745804.1 1284598..1286856(+) (clpE) [Streptococcus oralis strain 1648]
MLCQNCKINDSTIHLYTNINGQQKQIDLCQNCYKIIKTDPNNTLFKGMTDLNNHDFDPFGDFFNDLNNFKPSSNNVPPTQ
SGGGYGGNGGYGPQNRGPLQTPPSQERGLLEEYGINITEIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPGVG
KTAVVEGLAQKIVDGDVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSAGDG
NMDAGNILKPALARGELQMVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETIIILKGVQKKYEDYHHVKYTDAAIEA
AANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATREEDFEKAAYFRDQIAKYKEMQKN
KVTDQDTPIISEKTIEHIIEQKTNIPVGELKEKEQSQLIHLADDLKAHVIGQDEAVDKIAKAIRRNRVGLGTPNRPIGSF
LFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEVEK
AHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDGI
IEFKPLSKDNLLQIIELMLADVNKRLSSNNIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDFYLENPSEK
ALKAVMTSNGNIQIKSAKKPEKTEEIASEIEE
MLCQNCKINDSTIHLYTNINGQQKQIDLCQNCYKIIKTDPNNTLFKGMTDLNNHDFDPFGDFFNDLNNFKPSSNNVPPTQ
SGGGYGGNGGYGPQNRGPLQTPPSQERGLLEEYGINITEIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPGVG
KTAVVEGLAQKIVDGDVPHKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRKREDIILFIDEIHEIVGAGSAGDG
NMDAGNILKPALARGELQMVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETIIILKGVQKKYEDYHHVKYTDAAIEA
AANLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKVIDQRLIEAENLKAQATREEDFEKAAYFRDQIAKYKEMQKN
KVTDQDTPIISEKTIEHIIEQKTNIPVGELKEKEQSQLIHLADDLKAHVIGQDEAVDKIAKAIRRNRVGLGTPNRPIGSF
LFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEVEK
AHPDVMHMFLQVLDDGRLTDGQGRTVSFKDAIIIMTSNAGTGKAEASVGFGAAREGRTNSVLGELGNFFSPEFMNRFDGI
IEFKPLSKDNLLQIIELMLADVNKRLSSNNIHLDVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDFYLENPSEK
ALKAVMTSNGNIQIKSAKKPEKTEEIASEIEE
Nucleotide
Download Length: 2259 bp
>NTDB_id=668113 MP387_RS06280 WP_242745804.1 1284598..1286856(+) (clpE) [Streptococcus oralis strain 1648]
ATGCTCTGTCAAAACTGTAAAATAAACGACTCAACAATTCATCTGTATACCAATATCAATGGGCAGCAAAAGCAAATTGA
TCTCTGTCAAAATTGCTATAAAATTATCAAAACAGATCCAAATAATACCCTCTTTAAAGGAATGACTGACTTAAACAATC
ATGACTTTGATCCATTCGGCGACTTTTTCAATGATTTGAACAATTTCAAACCTTCTTCTAATAACGTCCCTCCAACTCAA
TCTGGTGGGGGATATGGAGGAAACGGTGGTTATGGACCTCAAAACCGCGGCCCACTTCAAACACCCCCTAGCCAAGAAAG
AGGACTCCTAGAGGAATACGGTATCAACATTACTGAGATTGCTCGTCGGGGAGATATTGACCCCGTTATTGGTCGAGATG
AGGAGATTATCCGCGTTATCGAAATCCTCAACCGTCGAACCAAGAACAACCCTGTCCTTATCGGAGAACCAGGTGTTGGT
AAAACAGCCGTTGTGGAAGGTCTAGCTCAGAAGATTGTCGATGGCGATGTTCCCCATAAACTCCAAGGCAAGCAGGTCAT
CCGTCTGGATGTGGTCAGTCTAGTCCAAGGAACAGGGATTCGAGGCCAATTTGAAGAACGTATGCAAAAGCTCATGGAAG
AAATTCGCAAACGCGAGGACATCATCCTCTTTATCGATGAAATCCATGAAATTGTTGGTGCTGGATCTGCTGGCGATGGC
AATATGGATGCAGGAAATATCCTCAAACCAGCCCTTGCCCGTGGTGAATTGCAAATGGTCGGAGCCACTACTCTCAATGA
ATACCGCATCATTGAAAAAGATGCTGCTTTGGAGCGCCGTATGCAGCCTGTCAAGGTAGATGAACCAACTGTCGAAGAAA
CCATTATCATCCTTAAAGGAGTTCAAAAGAAATACGAAGACTACCATCACGTCAAGTATACTGATGCTGCCATCGAAGCT
GCTGCAAATCTTTCCAACCGCTATATCCAAGACCGCTTCTTGCCAGACAAGGCTATTGACCTGTTGGACGAAGCTGGTTC
AAAGATGAATCTGACGCTGAACTTTGTTGATCCTAAAGTGATTGATCAGCGCTTGATTGAGGCTGAAAATCTCAAGGCTC
AAGCTACACGAGAGGAAGATTTTGAAAAGGCTGCTTATTTCCGCGATCAGATTGCCAAGTACAAGGAAATGCAGAAAAAC
AAGGTGACTGATCAGGATACTCCAATCATCAGCGAGAAAACCATCGAACATATCATTGAGCAAAAAACCAATATCCCTGT
TGGAGAACTCAAAGAAAAAGAACAATCTCAGCTTATCCATCTAGCAGACGACCTCAAAGCTCATGTCATTGGTCAAGATG
AAGCTGTCGATAAGATTGCCAAGGCAATCCGTCGTAATCGTGTTGGACTTGGAACTCCTAACCGGCCAATCGGAAGCTTC
CTCTTTGTCGGACCAACTGGTGTCGGTAAAACAGAACTTTCCAAACAACTAGCCATTGAGCTCTTTGGTTCTGCTGACAG
CATGATTCGCTTTGATATGAGTGAATACATGGAAAAACACAGTGTAGCTAAATTGGTCGGAGCCCCTCCAGGTTATGTTG
GTTATGATGAAGCTGGGCAGCTGACTGAAAAGGTTCGTCGCAACCCATATTCTCTCATCCTTCTCGATGAGGTCGAGAAA
GCCCATCCAGATGTGATGCACATGTTCCTTCAAGTCTTGGACGATGGTCGTTTGACTGATGGGCAAGGACGTACAGTTAG
CTTTAAGGATGCTATCATTATCATGACCTCAAATGCGGGTACTGGAAAGGCCGAAGCCAGTGTTGGTTTTGGGGCGGCTC
GCGAAGGACGTACCAACTCTGTTCTCGGTGAACTCGGCAACTTCTTTAGTCCGGAGTTTATGAACCGTTTTGACGGCATC
ATCGAATTTAAACCTCTCAGCAAGGACAACCTTCTCCAAATCATCGAACTCATGCTAGCGGATGTCAACAAACGCCTCTC
TAGCAACAATATCCACCTCGATGTGACAGACAAGGTCAAGGAAAAGTTGGTTGACTTAGGTTATGATCCAAAAATGGGAG
CACGCCCACTCCGCCGTACTATTCAAGACCATATCGAGGATGCCATCACTGATTTCTACCTTGAAAATCCAAGTGAGAAA
GCCCTCAAGGCAGTCATGACAAGCAATGGCAATATTCAAATCAAATCTGCCAAAAAACCTGAGAAAACAGAAGAGATTGC
TTCTGAAATAGAAGAATAA
ATGCTCTGTCAAAACTGTAAAATAAACGACTCAACAATTCATCTGTATACCAATATCAATGGGCAGCAAAAGCAAATTGA
TCTCTGTCAAAATTGCTATAAAATTATCAAAACAGATCCAAATAATACCCTCTTTAAAGGAATGACTGACTTAAACAATC
ATGACTTTGATCCATTCGGCGACTTTTTCAATGATTTGAACAATTTCAAACCTTCTTCTAATAACGTCCCTCCAACTCAA
TCTGGTGGGGGATATGGAGGAAACGGTGGTTATGGACCTCAAAACCGCGGCCCACTTCAAACACCCCCTAGCCAAGAAAG
AGGACTCCTAGAGGAATACGGTATCAACATTACTGAGATTGCTCGTCGGGGAGATATTGACCCCGTTATTGGTCGAGATG
AGGAGATTATCCGCGTTATCGAAATCCTCAACCGTCGAACCAAGAACAACCCTGTCCTTATCGGAGAACCAGGTGTTGGT
AAAACAGCCGTTGTGGAAGGTCTAGCTCAGAAGATTGTCGATGGCGATGTTCCCCATAAACTCCAAGGCAAGCAGGTCAT
CCGTCTGGATGTGGTCAGTCTAGTCCAAGGAACAGGGATTCGAGGCCAATTTGAAGAACGTATGCAAAAGCTCATGGAAG
AAATTCGCAAACGCGAGGACATCATCCTCTTTATCGATGAAATCCATGAAATTGTTGGTGCTGGATCTGCTGGCGATGGC
AATATGGATGCAGGAAATATCCTCAAACCAGCCCTTGCCCGTGGTGAATTGCAAATGGTCGGAGCCACTACTCTCAATGA
ATACCGCATCATTGAAAAAGATGCTGCTTTGGAGCGCCGTATGCAGCCTGTCAAGGTAGATGAACCAACTGTCGAAGAAA
CCATTATCATCCTTAAAGGAGTTCAAAAGAAATACGAAGACTACCATCACGTCAAGTATACTGATGCTGCCATCGAAGCT
GCTGCAAATCTTTCCAACCGCTATATCCAAGACCGCTTCTTGCCAGACAAGGCTATTGACCTGTTGGACGAAGCTGGTTC
AAAGATGAATCTGACGCTGAACTTTGTTGATCCTAAAGTGATTGATCAGCGCTTGATTGAGGCTGAAAATCTCAAGGCTC
AAGCTACACGAGAGGAAGATTTTGAAAAGGCTGCTTATTTCCGCGATCAGATTGCCAAGTACAAGGAAATGCAGAAAAAC
AAGGTGACTGATCAGGATACTCCAATCATCAGCGAGAAAACCATCGAACATATCATTGAGCAAAAAACCAATATCCCTGT
TGGAGAACTCAAAGAAAAAGAACAATCTCAGCTTATCCATCTAGCAGACGACCTCAAAGCTCATGTCATTGGTCAAGATG
AAGCTGTCGATAAGATTGCCAAGGCAATCCGTCGTAATCGTGTTGGACTTGGAACTCCTAACCGGCCAATCGGAAGCTTC
CTCTTTGTCGGACCAACTGGTGTCGGTAAAACAGAACTTTCCAAACAACTAGCCATTGAGCTCTTTGGTTCTGCTGACAG
CATGATTCGCTTTGATATGAGTGAATACATGGAAAAACACAGTGTAGCTAAATTGGTCGGAGCCCCTCCAGGTTATGTTG
GTTATGATGAAGCTGGGCAGCTGACTGAAAAGGTTCGTCGCAACCCATATTCTCTCATCCTTCTCGATGAGGTCGAGAAA
GCCCATCCAGATGTGATGCACATGTTCCTTCAAGTCTTGGACGATGGTCGTTTGACTGATGGGCAAGGACGTACAGTTAG
CTTTAAGGATGCTATCATTATCATGACCTCAAATGCGGGTACTGGAAAGGCCGAAGCCAGTGTTGGTTTTGGGGCGGCTC
GCGAAGGACGTACCAACTCTGTTCTCGGTGAACTCGGCAACTTCTTTAGTCCGGAGTTTATGAACCGTTTTGACGGCATC
ATCGAATTTAAACCTCTCAGCAAGGACAACCTTCTCCAAATCATCGAACTCATGCTAGCGGATGTCAACAAACGCCTCTC
TAGCAACAATATCCACCTCGATGTGACAGACAAGGTCAAGGAAAAGTTGGTTGACTTAGGTTATGATCCAAAAATGGGAG
CACGCCCACTCCGCCGTACTATTCAAGACCATATCGAGGATGCCATCACTGATTTCTACCTTGAAAATCCAAGTGAGAAA
GCCCTCAAGGCAGTCATGACAAGCAATGGCAATATTCAAATCAAATCTGCCAAAAAACCTGAGAAAACAGAAGAGATTGC
TTCTGAAATAGAAGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus pneumoniae Rx1 |
94.355 |
98.936 |
0.934 |
| clpE | Streptococcus pneumoniae D39 |
94.355 |
98.936 |
0.934 |
| clpE | Streptococcus pneumoniae R6 |
94.355 |
98.936 |
0.934 |
| clpE | Streptococcus pneumoniae TIGR4 |
94.22 |
98.936 |
0.932 |
| clpE | Streptococcus mutans UA159 |
83.024 |
100 |
0.832 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
77.671 |
97.074 |
0.754 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
52.388 |
86.303 |
0.452 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.889 |
87.633 |
0.411 |
| clpC | Streptococcus thermophilus LMD-9 |
46.751 |
83.91 |
0.392 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.508 |
83.777 |
0.39 |
| clpC | Streptococcus pneumoniae Rx1 |
47.021 |
82.58 |
0.388 |
| clpC | Streptococcus pneumoniae D39 |
47.021 |
82.58 |
0.388 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.021 |
82.58 |
0.388 |
| clpC | Streptococcus mutans UA159 |
46.349 |
83.777 |
0.388 |