Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   MP387_RS01680 Genome accession   NZ_CP094226
Coordinates   355805..356536 (+) Length   243 a.a.
NCBI ID   WP_242747218.1    Uniprot ID   -
Organism   Streptococcus oralis strain 1648     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 350805..361536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP387_RS01660 (MP387_01660) dnaK 351226..353049 (+) 1824 WP_242747214.1 molecular chaperone DnaK -
  MP387_RS01665 (MP387_01665) dnaJ 353453..354589 (+) 1137 WP_001066315.1 molecular chaperone DnaJ -
  MP387_RS01670 (MP387_01670) - 355030..355317 (-) 288 WP_000777744.1 hypothetical protein -
  MP387_RS01675 (MP387_01675) - 355327..355737 (-) 411 WP_242747216.1 HIT family protein -
  MP387_RS01680 (MP387_01680) pptA 355805..356536 (+) 732 WP_242747218.1 ABC transporter ATP-binding protein Regulator
  MP387_RS01685 (MP387_01685) - 356533..357582 (+) 1050 WP_242747219.1 ABC transporter permease -
  MP387_RS01690 (MP387_01690) - 357630..358424 (+) 795 WP_000363019.1 phosphotransferase family protein -
  MP387_RS01695 (MP387_01695) trmB 358421..359056 (+) 636 WP_033629357.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  MP387_RS01700 (MP387_01700) rimP 359183..359662 (+) 480 WP_000338690.1 ribosome maturation factor RimP -
  MP387_RS01705 (MP387_01705) nusA 359705..360841 (+) 1137 WP_000032277.1 transcription termination factor NusA -
  MP387_RS01710 (MP387_01710) - 360863..361156 (+) 294 WP_000857560.1 YlxR family protein -
  MP387_RS01715 (MP387_01715) - 361149..361448 (+) 300 WP_001041402.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27225.64 Da        Isoelectric Point: 4.6353

>NTDB_id=668093 MP387_RS01680 WP_242747218.1 355805..356536(+) (pptA) [Streptococcus oralis strain 1648]
MLEIRNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQNIAFDRVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAIADLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLQQLREAFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=668093 MP387_RS01680 WP_242747218.1 355805..356536(+) (pptA) [Streptococcus oralis strain 1648]
ATGTTAGAAATTAGAAACCTGACAGGAGGCTATGTTCACGTTCCTGTCTTGAAAGATGTGTCCTTTACAGTTGAAAGTGG
ACAGTTGGTCGGTTTGATTGGGCTCAACGGTGCTGGGAAATCAACGACAATCAATGAGATTATTGGTCTGTTGACACCTT
ACAGTGGAGAAATCAAGATTAATGGTCTCACCCTGCGAGAAGATGCGACCAGCTATCGCAAGCAGATTGGCTATATCCCA
GAAACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAGACGGTTGCCATGGCCTATGGTATTGAGCAGAA
TATAGCTTTTGATCGTGTGGAACCTTTGTTAAAAATGTTTCGTTTGGATCAAAAATTAGACTGGTTCCCAGTGCATTTCT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTCGTAGATCCGAGCCTTTTCATCGTTGATGAGCCTTTT
CTTGGTCTCGATCCCTTGGCGATTGCCGACTTGATTCAGCTTCTAGAAGTAGAAAAGCAAAAAGGCAAGTCCATCCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAAAAGATGTGTGACGCCTTTGTCATTCTCCACAAGGGAGAGGTGCGGGCTCAGG
GGAACCTCCAGCAACTCCGCGAAGCCTTTGACATGCCTGAAGCGAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.614

99.177

0.72
  pptA Streptococcus thermophilus LMD-9

71.784

99.177

0.712

Multiple sequence alignment