Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OIC43_RS25060 Genome accession   NZ_CP108876
Coordinates   5553977..5555101 (-) Length   374 a.a.
NCBI ID   WP_266690186.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00825     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5548977..5560101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OIC43_RS25035 (OIC43_25025) - 5549635..5550279 (-) 645 WP_266693783.1 hypothetical protein -
  OIC43_RS25040 (OIC43_25030) - 5550363..5550977 (-) 615 WP_124719463.1 SigE family RNA polymerase sigma factor -
  OIC43_RS25045 (OIC43_25035) - 5551156..5552058 (-) 903 WP_259934116.1 A/G-specific adenine glycosylase -
  OIC43_RS25050 (OIC43_25040) - 5552203..5552850 (-) 648 WP_266690183.1 phosphatase PAP2 family protein -
  OIC43_RS25055 (OIC43_25045) - 5553059..5553871 (+) 813 WP_266690185.1 hypothetical protein -
  OIC43_RS25060 (OIC43_25050) disA 5553977..5555101 (-) 1125 WP_266690186.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OIC43_RS25065 (OIC43_25055) radA/sms 5555182..5556594 (-) 1413 WP_124719461.1 DNA repair protein RadA Machinery gene
  OIC43_RS25070 (OIC43_25060) - 5556790..5558706 (+) 1917 WP_266690187.1 hypothetical protein -
  OIC43_RS25075 (OIC43_25065) - 5558816..5559685 (-) 870 WP_266690188.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40349.32 Da        Isoelectric Point: 4.9372

>NTDB_id=668060 OIC43_RS25060 WP_266690186.1 5553977..5555101(-) (disA) [Streptomyces sp. NBC_00825]
MAANDRAASPGKSGQGTGIEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELAVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=668060 OIC43_RS25060 WP_266690186.1 5553977..5555101(-) (disA) [Streptomyces sp. NBC_00825]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTATTGAGGCGCTCATGCGCGCCTCCCT
GAGCGCCGTGGCGCCCGGAATGGCGCTGCGGGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAATCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGCCTGCGC
GAGCTGGCCAAGCTCGACGGCGCGCTGATCCTCGACAAGGACATGACGAAGATCCTGCGCGCCGGCGTGCAGCTGGTGCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTCTCCAAGCAGTGCAATTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTCGCGCAGCGGCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCGGAGTACGTGGTCGAGCTGGGCACCGACGGCCGGCTTCTCTCGCTCCAGTTGGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGAGCTGGTGGTGCGCGACTACGTGCCGGAGCCGACCGCCAAGCGGTCCCGCACGGTCGCCGA
GGCGCTGACCGAGCTGGACGCGCTCTCCCACACCGAGCTGCTCGAACTCGCGGTCGTGGCGCGGGCGCTGGGCTACAGCG
GCTCGCCCGAGACGCTGGATTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCCAAGGTCCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCCAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTGCGCGAGGGGCTGTCCCGGCTGGCCGAGTCGTCGATCCTCGAACGCTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436


Multiple sequence alignment