Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG43_RS00285 | Genome accession | NZ_CP094175 |
| Coordinates | 63918..64493 (+) | Length | 191 a.a. |
| NCBI ID | WP_245030531.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe063 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 58918..69493
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG43_RS00260 (MPG43_00260) | uvrD | 59609..61654 (+) | 2046 | WP_245030525.1 | DNA helicase UvrD | - |
| MPG43_RS00265 (MPG43_00265) | flgA | 61651..62307 (+) | 657 | WP_245030527.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG43_RS00270 (MPG43_00270) | - | 62317..62880 (+) | 564 | WP_212794216.1 | UbiX family flavin prenyltransferase | - |
| MPG43_RS00275 (MPG43_00275) | coaD | 62880..63353 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG43_RS00280 (MPG43_00280) | tmk | 63355..63930 (+) | 576 | WP_245030529.1 | dTMP kinase | - |
| MPG43_RS00285 (MPG43_00285) | comFC | 63918..64493 (+) | 576 | WP_245030531.1 | ComF family protein | Machinery gene |
| MPG43_RS00290 (MPG43_00290) | - | 64526..66565 (+) | 2040 | Protein_56 | N-6 DNA methylase | - |
| MPG43_RS00295 (MPG43_00295) | - | 66562..67212 (+) | 651 | WP_245030533.1 | restriction endonuclease subunit S | - |
| MPG43_RS00300 (MPG43_00300) | - | 67239..67781 (+) | 543 | WP_245030534.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21297.91 Da Isoelectric Point: 8.7476
>NTDB_id=668008 MPG43_RS00285 WP_245030531.1 63918..64493(+) (comFC) [Helicobacter pylori strain Hpfe063]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGKEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNAVSYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGKEFVKILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGCLRATNAVSYAGKSLEFRANNPRDFTFKGDETLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=668008 MPG43_RS00285 WP_245030531.1 63918..64493(+) (comFC) [Helicobacter pylori strain Hpfe063]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCAAAGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCACATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGTGTTTAAGGGCGACTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTGGACTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCAAAGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCACATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAGCCCACTTACGGGTGTTTAAGGGCGACTAATGCTGTTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATGAAACTTTGGACTATTTCTTGCTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCGCACTTTGCAATCGCTCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.812 |
100 |
0.958 |