Detailed information
Bioinformatically predicted
Overview
| Name | comB3 | Type | Machinery gene |
| Locus tag | MPG23_RS07210 | Genome accession | NZ_CP094172 |
| Coordinates | 1519754..1520017 (-) | Length | 87 a.a. |
| NCBI ID | WP_000584971.1 | Uniprot ID | A0A0L0QIL1 |
| Organism | Helicobacter pylori strain Hpfe0002 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1514754..1525017
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG23_RS07195 (MPG23_07195) | - | 1515728..1517158 (-) | 1431 | WP_162972184.1 | COG3014 family protein | - |
| MPG23_RS07205 (MPG23_07205) | comB4 | 1517389..1519752 (-) | 2364 | WP_245088224.1 | VirB4 family type IV secretion/conjugal transfer ATPase | Machinery gene |
| MPG23_RS07210 (MPG23_07210) | comB3 | 1519754..1520017 (-) | 264 | WP_000584971.1 | hypothetical protein | Machinery gene |
| MPG23_RS07215 (MPG23_07215) | comB2 | 1520017..1520298 (-) | 282 | WP_001272686.1 | TrbC/VirB2 family protein | Machinery gene |
| MPG23_RS07220 (MPG23_07220) | - | 1520443..1521270 (-) | 828 | WP_245088227.1 | DUF5718 family protein | - |
| MPG23_RS07225 (MPG23_07225) | - | 1521359..1522411 (-) | 1053 | WP_245088230.1 | MnmA/TRMU family protein | - |
| MPG23_RS07230 (MPG23_07230) | dnaG | 1522408..1524087 (-) | 1680 | WP_245088233.1 | DNA primase | - |
| MPG23_RS07235 (MPG23_07235) | groES | 1524363..1524719 (+) | 357 | WP_096481042.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 87 a.a. Molecular weight: 10076.17 Da Isoelectric Point: 9.5507
>NTDB_id=667979 MPG23_RS07210 WP_000584971.1 1519754..1520017(-) (comB3) [Helicobacter pylori strain Hpfe0002]
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
Nucleotide
Download Length: 264 bp
>NTDB_id=667979 MPG23_RS07210 WP_000584971.1 1519754..1520017(-) (comB3) [Helicobacter pylori strain Hpfe0002]
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATCTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCACTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATCTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCACTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB3 | Helicobacter pylori 26695 |
96.552 |
100 |
0.966 |