Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG832_RS18680 Genome accession   NZ_CP108873
Coordinates   4127237..4128361 (+) Length   374 a.a.
NCBI ID   WP_266690186.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00826     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4122237..4133361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG832_RS18665 (OG832_18615) - 4122653..4123522 (+) 870 WP_266690188.1 hypothetical protein -
  OG832_RS18670 (OG832_18620) - 4123632..4125548 (-) 1917 WP_266690187.1 hypothetical protein -
  OG832_RS18675 (OG832_18625) radA/sms 4125744..4127156 (+) 1413 WP_124719461.1 DNA repair protein RadA Machinery gene
  OG832_RS18680 (OG832_18630) disA 4127237..4128361 (+) 1125 WP_266690186.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG832_RS18685 (OG832_18635) - 4128467..4129279 (-) 813 WP_266690185.1 hypothetical protein -
  OG832_RS18690 (OG832_18640) - 4129488..4130135 (+) 648 WP_266690183.1 phosphatase PAP2 family protein -
  OG832_RS18695 (OG832_18645) - 4130280..4131182 (+) 903 WP_259934116.1 A/G-specific adenine glycosylase -
  OG832_RS18700 (OG832_18650) - 4131361..4131975 (+) 615 WP_124719463.1 SigE family RNA polymerase sigma factor -
  OG832_RS18705 (OG832_18655) - 4131963..4132703 (+) 741 WP_405851107.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40349.32 Da        Isoelectric Point: 4.9372

>NTDB_id=667958 OG832_RS18680 WP_266690186.1 4127237..4128361(+) (disA) [Streptomyces sp. NBC_00826]
MAANDRAASPGKSGQGTGIEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELAVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=667958 OG832_RS18680 WP_266690186.1 4127237..4128361(+) (disA) [Streptomyces sp. NBC_00826]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTATTGAGGCGCTCATGCGCGCCTCCCT
GAGCGCCGTGGCGCCCGGAATGGCGCTGCGGGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGCGGGCTGATCGTGC
TCGGCATGGACAAGACCGTCGAATCGATGTGCACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGCCTGCGC
GAGCTGGCCAAGCTCGACGGCGCGCTGATCCTCGACAAGGACATGACGAAGATCCTGCGCGCCGGCGTGCAGCTGGTGCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTCTCCAAGCAGTGCAATTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTCGCGCAGCGGCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCGGAGTACGTGGTCGAGCTGGGCACCGACGGCCGGCTTCTCTCGCTCCAGTTGGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGAGCTGGTGGTGCGCGACTACGTGCCGGAGCCGACCGCCAAGCGGTCCCGCACGGTCGCCGA
GGCGCTGACCGAGCTGGACGCGCTCTCCCACACCGAGCTGCTCGAACTCGCGGTCGTGGCGCGGGCGCTGGGCTACAGCG
GCTCGCCCGAGACGCTGGATTCGGCGGTCTCGCCGCGCGGCTTCCGGCTGCTGGCCAAGGTCCCGCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCCAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCGCGGGCGCGCAGCGTGCGCGAGGGGCTGTCCCGGCTGGCCGAGTCGTCGATCCTCGAACGCTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436


Multiple sequence alignment