Detailed information
Bioinformatically predicted
Overview
| Name | comB3 | Type | Machinery gene |
| Locus tag | MPG77_RS07045 | Genome accession | NZ_CP094159 |
| Coordinates | 1478595..1478858 (-) | Length | 87 a.a. |
| NCBI ID | WP_000584971.1 | Uniprot ID | A0A0L0QIL1 |
| Organism | Helicobacter pylori strain Hpfe0020 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1473595..1483858
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG77_RS07030 (MPG77_07030) | - | 1474569..1475909 (-) | 1341 | WP_180756186.1 | hypothetical protein | - |
| MPG77_RS07040 (MPG77_07040) | comB4 | 1476230..1478593 (-) | 2364 | WP_245109452.1 | VirB4 family type IV secretion/conjugal transfer ATPase | Machinery gene |
| MPG77_RS07045 (MPG77_07045) | comB3 | 1478595..1478858 (-) | 264 | WP_000584971.1 | hypothetical protein | Machinery gene |
| MPG77_RS07050 (MPG77_07050) | comB2 | 1478858..1479139 (-) | 282 | WP_001272686.1 | TrbC/VirB2 family protein | Machinery gene |
| MPG77_RS07055 (MPG77_07055) | - | 1479284..1480111 (-) | 828 | WP_220924215.1 | DUF5718 family protein | - |
| MPG77_RS07060 (MPG77_07060) | - | 1480202..1481254 (-) | 1053 | WP_096391855.1 | MnmA/TRMU family protein | - |
| MPG77_RS07065 (MPG77_07065) | dnaG | 1481251..1482930 (-) | 1680 | WP_245109453.1 | DNA primase | - |
| MPG77_RS07070 (MPG77_07070) | groES | 1483206..1483562 (+) | 357 | WP_033122111.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 87 a.a. Molecular weight: 10076.17 Da Isoelectric Point: 9.5507
>NTDB_id=667785 MPG77_RS07045 WP_000584971.1 1478595..1478858(-) (comB3) [Helicobacter pylori strain Hpfe0020]
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
Nucleotide
Download Length: 264 bp
>NTDB_id=667785 MPG77_RS07045 WP_000584971.1 1478595..1478858(-) (comB3) [Helicobacter pylori strain Hpfe0020]
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATTTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGTTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGTAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATTTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGTTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGTAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB3 | Helicobacter pylori 26695 |
96.552 |
100 |
0.966 |