Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | MPG52_RS02370 | Genome accession | NZ_CP094157 |
| Coordinates | 506102..506506 (+) | Length | 134 a.a. |
| NCBI ID | WP_245077043.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe0021 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 501102..511506
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG52_RS02335 (MPG52_02335) | - | 501265..502203 (-) | 939 | WP_180604957.1 | tetraacyldisaccharide 4'-kinase | - |
| MPG52_RS02340 (MPG52_02340) | - | 502200..502982 (-) | 783 | WP_180497309.1 | NAD+ synthase | - |
| MPG52_RS02350 (MPG52_02350) | ilvC | 503240..504232 (+) | 993 | WP_245077039.1 | ketol-acid reductoisomerase | - |
| MPG52_RS02355 (MPG52_02355) | minD | 504257..505063 (+) | 807 | WP_245077041.1 | septum site-determining protein MinD | - |
| MPG52_RS02360 (MPG52_02360) | minE | 505060..505293 (+) | 234 | WP_000051407.1 | cell division topological specificity factor MinE | - |
| MPG52_RS02365 (MPG52_02365) | dprA | 505305..506105 (+) | 801 | WP_180604970.1 | DNA-processing protein DprA | Machinery gene |
| MPG52_RS02370 (MPG52_02370) | dprB | 506102..506506 (+) | 405 | WP_245077043.1 | Holliday junction resolvase RuvX | Machinery gene |
| MPG52_RS02375 (MPG52_02375) | - | 506639..507316 (+) | 678 | WP_180604976.1 | tetratricopeptide repeat protein | - |
| MPG52_RS02380 (MPG52_02380) | - | 507501..507839 (+) | 339 | WP_180385775.1 | hypothetical protein | - |
| MPG52_RS02385 (MPG52_02385) | - | 507823..508383 (+) | 561 | WP_180385774.1 | hypothetical protein | - |
| MPG52_RS02390 (MPG52_02390) | - | 508548..509429 (-) | 882 | WP_245077045.1 | RluA family pseudouridine synthase | - |
| MPG52_RS02395 (MPG52_02395) | recJ | 509429..510979 (-) | 1551 | WP_245077047.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15242.67 Da Isoelectric Point: 8.2908
>NTDB_id=667760 MPG52_RS02370 WP_245077043.1 506102..506506(+) (dprB) [Helicobacter pylori strain Hpfe0021]
MILACDVGLKRIGIAVLLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTHARIEHFIKLVDFKGE
IVFINEDSSSIEAYENLEHLGRKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
MILACDVGLKRIGIAVLLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTHARIEHFIKLVDFKGE
IVFINEDSSSIEAYENLEHLGRKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
Nucleotide
Download Length: 405 bp
>NTDB_id=667760 MPG52_RS02370 WP_245077043.1 506102..506506(+) (dprB) [Helicobacter pylori strain Hpfe0021]
ATGATTTTAGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGTGCTTTTAAACGGCGTTATCCTGCCTTTAGAAGC
GATTTTACGCCACAACAGAAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAAGTGCTAGTGG
TGGGCAAGCCTAATGAAAGTTATGCGGATACCCACGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAACGAAGACAGCTCCAGTATAGAAGCTTATGAAAATTTAGAGCATTTGGGTAGGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGTTAGACTCTTTGAGTGCTTGTAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
ATGATTTTAGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGTGCTTTTAAACGGCGTTATCCTGCCTTTAGAAGC
GATTTTACGCCACAACAGAAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAAGTGCTAGTGG
TGGGCAAGCCTAATGAAAGTTATGCGGATACCCACGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAACGAAGACAGCTCCAGTATAGAAGCTTATGAAAATTTAGAGCATTTGGGTAGGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGTTAGACTCTTTGAGTGCTTGTAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
95.522 |
100 |
0.955 |