Detailed information NTG0667732

Bioinformatically predicted

Overview

• Name: comB10
• Type: Machinery gene
• Locus tag: MPG67_RS02470
• Genome accession: NZ_CP094156
• Coordinates: 497197..498399 (-)
• Length: 400 a.a.
• NCBI ID: WP_245073091.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain Hpfe005
• Function: transformation-associated type IV transport system (predicted from homology) DNA binding and uptake

Genomic Context

Location: 492197..503399

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MPG67_RS02445 (MPG67_02445)	-	492226..492744 (-)	519	WP_245073085.1	replication regulatory RepB family protein	-
MPG67_RS02450 (MPG67_02450)	-	492741..493685 (-)	945	WP_245073087.1	CpaF/VirB11 family protein	-
MPG67_RS02455 (MPG67_02455)	-	493690..493962 (-)	273	WP_245073088.1	hypothetical protein	-
MPG67_RS02460 (MPG67_02460)	-	493980..494957 (-)	978	WP_245073089.1	hypothetical protein	-
MPG67_RS02465 (MPG67_02465)	-	494970..497213 (-)	2244	WP_245073090.1	collagen-like protein	-
MPG67_RS02470 (MPG67_02470)	comB10	497197..498399 (-)	1203	WP_245073091.1	DNA type IV secretion system protein ComB10	Machinery gene
MPG67_RS02475 (MPG67_02475)	-	498396..500072 (-)	1677	WP_245073092.1	TrbG/VirB9 family P-type conjugative transfer protein	-
MPG67_RS02480 (MPG67_02480)	-	500069..501238 (-)	1170	WP_245073094.1	VirB8/TrbF family protein	-
MPG67_RS02485 (MPG67_02485)	-	501231..501365 (-)	135	WP_000738749.1	hypothetical protein	-

Sequence

Protein

• Length: 400 a.a.
• Molecular weight: 44735.46 Da
• Isoelectric Point: 9.9018

>NTDB_id=667732 MPG67_RS02470 WP_245073091.1 497197..498399(-) (comB10) [Helicobacter pylori strain Hpfe005]
MKQSLLKKIGLVIGGFGVLMALGLLANKGSNNNNKEEIYSIEESKFPLSDYFFEEVKEEPKKEENPKTITTPQPTAPTTA
NVSTNPIITDYSHLNGNLNKQNDTITHLQQVLQSPPKMKPKLKHTKEQLEFLNTRLKPLEPTKPAIKPETEYGVDSFSNL
RYKDIGTNEHKLLRTITADRMIPAFLITPISSQIAGKVTAQVESDIFASMGRAVLIPKGSKVIGYYDNNNQIGQYRLNIA
WTRIITPQGINIMLTNARGADVKGYNGLVGKYISRNFQRYGIPLLTNTLSNGILIGVTSALANQQNKKGDGNPFFGDYLL
MQLTRNTGMGINQVINQMLRQYGAQNPIIIIREGSRVFITPNLDIFIPKPKDGEVLAEFFKEKKPLIKKSNEEVNNEEEI

Nucleotide

• Length: 1203 bp

>NTDB_id=667732 MPG67_RS02470 WP_245073091.1 497197..498399(-) (comB10) [Helicobacter pylori strain Hpfe005]
ATGAAACAATCCTTACTTAAAAAAATCGGCTTAGTTATAGGGGGCTTTGGTGTTTTAATGGCATTAGGATTGCTTGCTAA
TAAAGGTTCAAACAATAACAATAAAGAAGAAATTTACAGCATAGAAGAAAGTAAATTCCCCTTAAGCGATTATTTCTTTG
AAGAAGTCAAAGAAGAACCAAAAAAAGAAGAAAACCCCAAAACAATAACTACGCCACAACCTACGGCTCCAACTACTGCC
AATGTTTCAACTAATCCTATCATTACAGATTATAGTCATCTTAACGGCAATCTCAACAAGCAAAATGACACCATCACGCA
TTTGCAACAAGTTTTACAAAGCCCCCCTAAAATGAAACCTAAATTAAAGCATACTAAAGAGCAATTAGAATTTTTAAACA
CACGCCTTAAACCTTTAGAACCAACTAAACCAGCCATTAAGCCTGAGACGGAATATGGCGTGGATAGTTTTAGCAATTTA
AGATATAAAGACATCGGCACTAATGAGCATAAGCTATTAAGAACTATAACCGCTGATAGAATGATACCAGCCTTTTTAAT
CACGCCTATTAGTTCTCAAATCGCTGGAAAAGTAACCGCTCAAGTAGAGAGCGATATTTTTGCTTCTATGGGTAGAGCGG
TGCTAATTCCTAAAGGCTCTAAAGTTATAGGCTATTACGATAACAATAATCAAATCGGGCAATACCGCTTAAACATTGCT
TGGACTAGAATTATCACCCCTCAAGGCATAAATATCATGCTCACTAATGCAAGGGGGGCTGATGTGAAAGGCTATAACGG
ATTAGTAGGCAAATATATTAGCCGAAATTTCCAACGCTATGGTATCCCCTTACTCACTAACACGCTTTCTAATGGGATTT
TAATAGGAGTTACTTCAGCCTTAGCTAATCAACAAAATAAAAAAGGTGATGGCAACCCTTTTTTTGGGGATTACTTGCTT
ATGCAACTCACTAGAAACACAGGCATGGGGATTAACCAAGTTATCAATCAAATGCTAAGACAATATGGAGCGCAAAACCC
CATTATCATCATTAGAGAGGGAAGCAGAGTGTTTATTACCCCTAATTTAGACATCTTTATCCCTAAACCAAAAGATGGGG
AGGTTCTAGCGGAGTTTTTTAAAGAGAAAAAACCACTAATCAAAAAATCAAACGAGGAAGTTAATAATGAAGAAGAAATC
TAA

Domains

Predicted by InterProScan.

• Bacterial conjugation TrbI-like protein (TrbI) (175-365)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB10	Helicobacter pylori P1	52.672	98.25	0.518