Detailed information
Bioinformatically predicted
Overview
| Name | comB3 | Type | Machinery gene |
| Locus tag | MPG81_RS07180 | Genome accession | NZ_CP094151 |
| Coordinates | 1510854..1511117 (-) | Length | 87 a.a. |
| NCBI ID | WP_000584955.1 | Uniprot ID | K7YLH7 |
| Organism | Helicobacter pylori strain Hpfe019 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1505854..1516117
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG81_RS07165 (MPG81_07165) | - | 1506846..1508186 (-) | 1341 | WP_245088402.1 | hypothetical protein | - |
| MPG81_RS07175 (MPG81_07175) | comB4 | 1508488..1510851 (-) | 2364 | WP_245086920.1 | VirB4 family type IV secretion/conjugal transfer ATPase | Machinery gene |
| MPG81_RS07180 (MPG81_07180) | comB3 | 1510854..1511117 (-) | 264 | WP_000584955.1 | hypothetical protein | Machinery gene |
| MPG81_RS07185 (MPG81_07185) | comB2 | 1511117..1511398 (-) | 282 | WP_001272686.1 | TrbC/VirB2 family protein | Machinery gene |
| MPG81_RS07190 (MPG81_07190) | - | 1511543..1512370 (-) | 828 | WP_245086922.1 | DUF5718 family protein | - |
| MPG81_RS07195 (MPG81_07195) | - | 1512461..1513513 (-) | 1053 | WP_245086924.1 | MnmA/TRMU family protein | - |
| MPG81_RS07200 (MPG81_07200) | dnaG | 1513510..1515189 (-) | 1680 | WP_245086926.1 | DNA primase | - |
| MPG81_RS07205 (MPG81_07205) | groES | 1515464..1515820 (+) | 357 | WP_000671954.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 87 a.a. Molecular weight: 10048.12 Da Isoelectric Point: 9.5507
>NTDB_id=667695 MPG81_RS07180 WP_000584955.1 1510854..1511117(-) (comB3) [Helicobacter pylori strain Hpfe019]
MIILSASVKNLREISVKEKFLWLNAKSYLISVFAPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
MIILSASVKNLREISVKEKFLWLNAKSYLISVFAPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
Nucleotide
Download Length: 264 bp
>NTDB_id=667695 MPG81_RS07180 WP_000584955.1 1510854..1511117(-) (comB3) [Helicobacter pylori strain Hpfe019]
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGCGCCTTTTATCTTGCTCCCTTGGATTGATTTGTTGAGTGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAA
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGCGCCTTTTATCTTGCTCCCTTGGATTGATTTGTTGAGTGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB3 | Helicobacter pylori 26695 |
97.701 |
100 |
0.977 |