Detailed information
Bioinformatically predicted
Overview
| Name | comB3 | Type | Machinery gene |
| Locus tag | MPG09_RS07205 | Genome accession | NZ_CP094150 |
| Coordinates | 1522260..1522523 (-) | Length | 87 a.a. |
| NCBI ID | WP_000584971.1 | Uniprot ID | A0A0L0QIL1 |
| Organism | Helicobacter pylori strain Hpfe022 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1517260..1527523
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG09_RS07190 (MPG09_07190) | - | 1518234..1519574 (-) | 1341 | WP_245026989.1 | hypothetical protein | - |
| MPG09_RS07200 (MPG09_07200) | comB4 | 1519895..1522258 (-) | 2364 | WP_245026991.1 | VirB4 family type IV secretion/conjugal transfer ATPase | Machinery gene |
| MPG09_RS07205 (MPG09_07205) | comB3 | 1522260..1522523 (-) | 264 | WP_000584971.1 | hypothetical protein | Machinery gene |
| MPG09_RS07210 (MPG09_07210) | comB2 | 1522523..1522804 (-) | 282 | WP_001272686.1 | TrbC/VirB2 family protein | Machinery gene |
| MPG09_RS07215 (MPG09_07215) | - | 1522949..1523776 (-) | 828 | WP_171923752.1 | DUF5718 family protein | - |
| MPG09_RS07220 (MPG09_07220) | - | 1523867..1524919 (-) | 1053 | WP_245026993.1 | MnmA/TRMU family protein | - |
| MPG09_RS07225 (MPG09_07225) | dnaG | 1524916..1526595 (-) | 1680 | WP_245026995.1 | DNA primase | - |
| MPG09_RS07230 (MPG09_07230) | groES | 1526872..1527228 (+) | 357 | WP_000671946.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 87 a.a. Molecular weight: 10076.17 Da Isoelectric Point: 9.5507
>NTDB_id=667675 MPG09_RS07205 WP_000584971.1 1522260..1522523(-) (comB3) [Helicobacter pylori strain Hpfe022]
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
Nucleotide
Download Length: 264 bp
>NTDB_id=667675 MPG09_RS07205 WP_000584971.1 1522260..1522523(-) (comB3) [Helicobacter pylori strain Hpfe022]
ATGATCATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATCTTGCTCCCTTGGATTGATTTGTTGAGTGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
ATGATCATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATCTTGCTCCCTTGGATTGATTTGTTGAGTGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB3 | Helicobacter pylori 26695 |
96.552 |
100 |
0.966 |