Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   OHA79_RS15665 Genome accession   NZ_CP108853
Coordinates   3418160..3419236 (+) Length   358 a.a.
NCBI ID   WP_266986499.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00841     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 3413160..3424236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA79_RS15640 (OHA79_15620) - 3413676..3414944 (-) 1269 WP_266986507.1 histidine kinase -
  OHA79_RS15645 (OHA79_15625) - 3415099..3415377 (-) 279 WP_266986505.1 hypothetical protein -
  OHA79_RS15650 (OHA79_15630) - 3415392..3416174 (-) 783 WP_266986503.1 PspA/IM30 family protein -
  OHA79_RS15655 (OHA79_15635) - 3416471..3417070 (+) 600 WP_266986501.1 DUF3043 domain-containing protein -
  OHA79_RS15660 (OHA79_15640) - 3417187..3417921 (+) 735 WP_266990782.1 methyltransferase domain-containing protein -
  OHA79_RS15665 (OHA79_15645) htrA 3418160..3419236 (+) 1077 WP_266986499.1 trypsin-like peptidase domain-containing protein Regulator
  OHA79_RS15670 (OHA79_15650) - 3419305..3419514 (-) 210 WP_030933634.1 hypothetical protein -
  OHA79_RS15675 (OHA79_15655) - 3419626..3420828 (+) 1203 WP_266986497.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase -
  OHA79_RS15680 (OHA79_15660) - 3420869..3421696 (+) 828 WP_266986495.1 class I SAM-dependent methyltransferase -
  OHA79_RS15685 (OHA79_15665) cobT 3421812..3422894 (+) 1083 WP_266986493.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 36406.29 Da        Isoelectric Point: 5.7248

>NTDB_id=667607 OHA79_RS15665 WP_266986499.1 3418160..3419236(+) (htrA) [Streptomyces sp. NBC_00841]
MDASHSRGRLYRLLLPLTAGVCAIALVSGCSDSDSASADATKSASPHATSRAAGDLQAEYQTVIKNVLPSVVQIQAANSL
GSGIVYDDKGHIVTNAHVVGQEKTFKVTVVTGEKVLGASLVATYPEQDLAVIKLDNVPSGLKAAKFGNSDKVEVGQIVLA
MGSPLGLSSSVTQGIVSAVGRTVSESREDGGTGATIANMVQTSAAINPGNSGGALVNLDSEVIGIPTLAATDPQMNGAAP
GIGFAIPVSMVKTVADQIIKSGKVTDSGRAALNITGRTVVDDNYQPFGVALVTVTPGGGADKAGLRVGDIVTKIDDTRIT
TMTELAETLAGNKPGQKVKVTYLRNGVENTAVVTLGEI

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=667607 OHA79_RS15665 WP_266986499.1 3418160..3419236(+) (htrA) [Streptomyces sp. NBC_00841]
ATGGATGCTTCCCACTCGCGCGGCCGTTTGTACCGGCTGCTGCTGCCTCTGACCGCAGGTGTCTGTGCCATAGCCCTGGT
GTCCGGCTGCTCGGACTCGGACTCGGCCAGCGCCGATGCCACGAAGTCGGCCTCGCCGCATGCGACTTCCCGGGCCGCAG
GTGACCTGCAGGCCGAATACCAGACCGTCATCAAAAACGTGCTGCCCTCCGTGGTACAGATCCAAGCCGCCAACAGTCTC
GGATCCGGCATCGTCTACGACGACAAGGGCCATATCGTCACCAATGCCCATGTGGTCGGCCAGGAGAAGACGTTCAAGGT
CACCGTCGTCACCGGCGAGAAGGTGCTGGGCGCCTCGCTGGTCGCCACCTATCCGGAGCAGGACCTGGCCGTCATCAAGC
TCGACAACGTACCGAGCGGGCTGAAGGCGGCGAAGTTCGGCAACTCGGATAAGGTCGAGGTCGGTCAGATAGTGCTGGCG
ATGGGTTCGCCGCTCGGACTGTCCAGCAGCGTCACCCAGGGCATCGTGTCGGCGGTCGGCCGGACCGTCAGCGAGAGCCG
GGAGGACGGTGGCACCGGGGCGACCATAGCGAACATGGTGCAGACCTCGGCCGCGATCAACCCGGGCAACAGCGGCGGTG
CGCTGGTGAACCTGGACAGCGAGGTGATCGGCATTCCGACGCTGGCGGCGACGGATCCGCAGATGAACGGCGCGGCACCG
GGCATCGGGTTCGCGATCCCCGTCTCGATGGTGAAGACGGTGGCCGACCAGATCATCAAGAGCGGCAAGGTCACCGACTC
GGGCCGAGCGGCGCTGAACATCACCGGCCGCACAGTCGTCGACGACAACTACCAGCCGTTCGGAGTCGCGCTGGTCACCG
TCACGCCGGGCGGAGGCGCGGACAAGGCCGGACTGCGGGTCGGCGACATCGTCACGAAGATCGACGACACACGGATCACG
ACGATGACGGAGCTGGCCGAGACGCTGGCCGGCAATAAGCCGGGCCAGAAGGTCAAGGTGACATATCTGCGCAACGGTGT
GGAGAATACCGCGGTCGTCACTCTGGGCGAGATCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

35.156

100

0.377


Multiple sequence alignment