Detailed information
Bioinformatically predicted
Overview
| Name | comB3 | Type | Machinery gene |
| Locus tag | MPG51_RS06940 | Genome accession | NZ_CP094145 |
| Coordinates | 1462387..1462650 (-) | Length | 87 a.a. |
| NCBI ID | WP_000584955.1 | Uniprot ID | K7YLH7 |
| Organism | Helicobacter pylori strain Hpfe028 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1457387..1467650
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG51_RS06925 (MPG51_06925) | - | 1458380..1459810 (-) | 1431 | WP_245034063.1 | COG3014 family protein | - |
| MPG51_RS06935 (MPG51_06935) | comB4 | 1460022..1462385 (-) | 2364 | WP_245034065.1 | VirB4 family type IV secretion/conjugal transfer ATPase | Machinery gene |
| MPG51_RS06940 (MPG51_06940) | comB3 | 1462387..1462650 (-) | 264 | WP_000584955.1 | hypothetical protein | Machinery gene |
| MPG51_RS06945 (MPG51_06945) | comB2 | 1462650..1462931 (-) | 282 | WP_001272686.1 | TrbC/VirB2 family protein | Machinery gene |
| MPG51_RS06950 (MPG51_06950) | - | 1463076..1463903 (-) | 828 | WP_245034067.1 | DUF5718 family protein | - |
| MPG51_RS06955 (MPG51_06955) | - | 1463994..1465046 (-) | 1053 | WP_245034069.1 | MnmA/TRMU family protein | - |
| MPG51_RS06960 (MPG51_06960) | dnaG | 1465043..1466722 (-) | 1680 | WP_245034071.1 | DNA primase | - |
| MPG51_RS06965 (MPG51_06965) | groES | 1467007..1467363 (+) | 357 | WP_245034073.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 87 a.a. Molecular weight: 10048.12 Da Isoelectric Point: 9.5507
>NTDB_id=667585 MPG51_RS06940 WP_000584955.1 1462387..1462650(-) (comB3) [Helicobacter pylori strain Hpfe028]
MIILSASVKNLREISVKEKFLWLNAKSYLISVFAPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
MIILSASVKNLREISVKEKFLWLNAKSYLISVFAPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
Nucleotide
Download Length: 264 bp
>NTDB_id=667585 MPG51_RS06940 WP_000584955.1 1462387..1462650(-) (comB3) [Helicobacter pylori strain Hpfe028]
ATGATTATCCTGTCAGCGAGTGTGAAGAATCTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGCGCCTTTTATTTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGTTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
ATGATTATCCTGTCAGCGAGTGTGAAGAATCTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGCGCCTTTTATTTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGTTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGCAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB3 | Helicobacter pylori 26695 |
97.701 |
100 |
0.977 |