Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG35_RS00260 | Genome accession | NZ_CP094138 |
| Coordinates | 60759..61334 (+) | Length | 191 a.a. |
| NCBI ID | WP_245019636.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe037 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55759..66334
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG35_RS00235 (MPG35_00235) | uvrD | 56450..58495 (+) | 2046 | WP_245019633.1 | DNA helicase UvrD | - |
| MPG35_RS00240 (MPG35_00240) | flgA | 58492..59148 (+) | 657 | WP_245019634.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG35_RS00245 (MPG35_00245) | - | 59158..59721 (+) | 564 | WP_000780116.1 | UbiX family flavin prenyltransferase | - |
| MPG35_RS00250 (MPG35_00250) | coaD | 59721..60194 (+) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG35_RS00255 (MPG35_00255) | tmk | 60196..60771 (+) | 576 | WP_245019635.1 | dTMP kinase | - |
| MPG35_RS00260 (MPG35_00260) | comFC | 60759..61334 (+) | 576 | WP_245019636.1 | ComF family protein | Machinery gene |
| MPG35_RS00265 (MPG35_00265) | - | 61367..63406 (+) | 2040 | WP_245019637.1 | N-6 DNA methylase | - |
| MPG35_RS00270 (MPG35_00270) | - | 63403..64605 (+) | 1203 | WP_245019638.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21314.84 Da Isoelectric Point: 8.8864
>NTDB_id=667444 MPG35_RS00260 WP_245019636.1 60759..61334(+) (comFC) [Helicobacter pylori strain Hpfe037]
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRVNNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
MRCLTCLKLSFKPLCSNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRANNAVSYAGKSLEFRVNNPRDFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNTKVHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=667444 MPG35_RS00260 WP_245019636.1 60759..61334(+) (comFC) [Helicobacter pylori strain Hpfe037]
ATGCGCTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCTTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCCCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCGGGGAAAAGCTTAG
AATTTCGCGTCAACAACCCACGGGATTTCACCTTCAAGGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGCTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGTTCAAATTGCTTGAACGATTTGCCTTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCCCAAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTAATAATGCTGTTTCGTATGCGGGGAAAAGCTTAG
AATTTCGCGTCAACAACCCACGGGATTTCACCTTCAAGGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACACAAAAGTGCACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |