Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | OG584_RS01450 | Genome accession | NZ_CP108826 |
| Coordinates | 319477..320589 (+) | Length | 370 a.a. |
| NCBI ID | WP_405774141.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_00859 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 314477..325589
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OG584_RS01435 (OG584_01425) | - | 314701..315135 (+) | 435 | WP_405774135.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| OG584_RS01440 (OG584_01430) | - | 315132..315656 (+) | 525 | WP_405774137.1 | type II secretion system protein | - |
| OG584_RS01445 (OG584_01435) | - | 315653..319480 (+) | 3828 | WP_405774139.1 | hypothetical protein | - |
| OG584_RS01450 (OG584_01440) | pilT | 319477..320589 (+) | 1113 | WP_405774141.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| OG584_RS01455 (OG584_01445) | - | 320908..322017 (+) | 1110 | WP_405774142.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| OG584_RS01460 (OG584_01450) | - | 322126..324357 (-) | 2232 | WP_405774144.1 | serine/threonine-protein kinase | - |
Sequence
Protein
Download Length: 370 a.a. Molecular weight: 40282.79 Da Isoelectric Point: 6.1344
>NTDB_id=667307 OG584_RS01450 WP_405774141.1 319477..320589(+) (pilT) [Streptomyces sp. NBC_00859]
MSEHAPLEATMTGPRATIIDHLLGELWERGGSDLLLTARSAPFLRVDGALRPVEGAALTEPEVDRLVTGVLGEELTERFR
REKQVDFAFSWGERARLRGNAFVQRGASALALRIIPFDVPSSEQLGLPPVVVGWAGMPRGFVLVTGPTGSGKSTSLAALL
DYVNTHRSVHILTIEDPIEYLHRHKRSAVNQREVGTDTDSFPAALRSALREDPDVLLLGEMRDPESISAALTIAETGHLV
FATLHTNDTSQTLDRIVDVFPAEQQPQIRLQLAHTLVGILNQTLIPRTGGGRVAAFEVLVGTSAIRNLIREGKTRQIRNM
VSTGHRDGMQTLETSINALVSAGTIAYEEAVLSTAYPEDIQRPHVPVGRT
MSEHAPLEATMTGPRATIIDHLLGELWERGGSDLLLTARSAPFLRVDGALRPVEGAALTEPEVDRLVTGVLGEELTERFR
REKQVDFAFSWGERARLRGNAFVQRGASALALRIIPFDVPSSEQLGLPPVVVGWAGMPRGFVLVTGPTGSGKSTSLAALL
DYVNTHRSVHILTIEDPIEYLHRHKRSAVNQREVGTDTDSFPAALRSALREDPDVLLLGEMRDPESISAALTIAETGHLV
FATLHTNDTSQTLDRIVDVFPAEQQPQIRLQLAHTLVGILNQTLIPRTGGGRVAAFEVLVGTSAIRNLIREGKTRQIRNM
VSTGHRDGMQTLETSINALVSAGTIAYEEAVLSTAYPEDIQRPHVPVGRT
Nucleotide
Download Length: 1113 bp
>NTDB_id=667307 OG584_RS01450 WP_405774141.1 319477..320589(+) (pilT) [Streptomyces sp. NBC_00859]
ATGAGCGAACACGCCCCCTTGGAGGCCACCATGACCGGGCCACGTGCCACGATCATCGACCACCTGCTCGGTGAGCTGTG
GGAGCGGGGCGGCAGCGACCTGCTGCTCACCGCCCGATCGGCGCCGTTCCTCCGCGTCGACGGCGCCCTGCGGCCGGTCG
AGGGGGCCGCGCTGACCGAGCCGGAGGTCGATCGCCTGGTGACCGGGGTGCTGGGCGAGGAACTCACGGAACGGTTCCGC
CGGGAGAAGCAGGTCGATTTCGCGTTCAGCTGGGGGGAGAGGGCCAGGTTGCGCGGGAACGCTTTCGTCCAGCGCGGCGC
GTCGGCGCTGGCGCTGCGGATCATCCCGTTCGACGTACCGTCGTCCGAGCAGCTCGGGCTCCCCCCGGTCGTCGTCGGAT
GGGCCGGCATGCCGCGCGGGTTCGTGCTGGTCACCGGGCCGACCGGGTCGGGGAAGTCGACGAGCCTGGCGGCGCTCCTC
GACTACGTCAACACGCACCGGTCGGTGCACATCCTCACCATCGAGGACCCGATCGAGTATCTGCACCGGCACAAGCGCTC
GGCGGTCAACCAGCGCGAGGTCGGCACCGACACCGACTCGTTCCCTGCCGCGCTGCGCTCGGCCCTGCGCGAGGATCCCG
ACGTCCTGCTCCTCGGCGAGATGCGCGACCCGGAGAGCATCTCAGCGGCCCTGACCATCGCCGAGACCGGGCACCTGGTG
TTCGCCACCCTGCATACCAACGACACGTCGCAGACGCTGGACCGCATCGTCGACGTGTTCCCGGCCGAGCAACAGCCCCA
GATCCGGCTGCAATTGGCGCACACTCTGGTCGGCATCCTCAACCAGACGCTCATCCCCCGGACCGGTGGGGGCCGGGTGG
CCGCCTTCGAGGTGCTGGTGGGCACGTCGGCGATCCGCAACCTGATCCGCGAGGGCAAGACCCGCCAGATCCGGAACATG
GTCTCGACCGGCCACCGTGACGGCATGCAGACCCTGGAGACCAGCATCAACGCCCTCGTCTCGGCAGGCACCATCGCCTA
CGAAGAGGCCGTGCTGTCCACGGCCTACCCGGAGGACATCCAGCGGCCCCACGTCCCGGTCGGCCGCACCTGA
ATGAGCGAACACGCCCCCTTGGAGGCCACCATGACCGGGCCACGTGCCACGATCATCGACCACCTGCTCGGTGAGCTGTG
GGAGCGGGGCGGCAGCGACCTGCTGCTCACCGCCCGATCGGCGCCGTTCCTCCGCGTCGACGGCGCCCTGCGGCCGGTCG
AGGGGGCCGCGCTGACCGAGCCGGAGGTCGATCGCCTGGTGACCGGGGTGCTGGGCGAGGAACTCACGGAACGGTTCCGC
CGGGAGAAGCAGGTCGATTTCGCGTTCAGCTGGGGGGAGAGGGCCAGGTTGCGCGGGAACGCTTTCGTCCAGCGCGGCGC
GTCGGCGCTGGCGCTGCGGATCATCCCGTTCGACGTACCGTCGTCCGAGCAGCTCGGGCTCCCCCCGGTCGTCGTCGGAT
GGGCCGGCATGCCGCGCGGGTTCGTGCTGGTCACCGGGCCGACCGGGTCGGGGAAGTCGACGAGCCTGGCGGCGCTCCTC
GACTACGTCAACACGCACCGGTCGGTGCACATCCTCACCATCGAGGACCCGATCGAGTATCTGCACCGGCACAAGCGCTC
GGCGGTCAACCAGCGCGAGGTCGGCACCGACACCGACTCGTTCCCTGCCGCGCTGCGCTCGGCCCTGCGCGAGGATCCCG
ACGTCCTGCTCCTCGGCGAGATGCGCGACCCGGAGAGCATCTCAGCGGCCCTGACCATCGCCGAGACCGGGCACCTGGTG
TTCGCCACCCTGCATACCAACGACACGTCGCAGACGCTGGACCGCATCGTCGACGTGTTCCCGGCCGAGCAACAGCCCCA
GATCCGGCTGCAATTGGCGCACACTCTGGTCGGCATCCTCAACCAGACGCTCATCCCCCGGACCGGTGGGGGCCGGGTGG
CCGCCTTCGAGGTGCTGGTGGGCACGTCGGCGATCCGCAACCTGATCCGCGAGGGCAAGACCCGCCAGATCCGGAACATG
GTCTCGACCGGCCACCGTGACGGCATGCAGACCCTGGAGACCAGCATCAACGCCCTCGTCTCGGCAGGCACCATCGCCTA
CGAAGAGGCCGTGCTGTCCACGGCCTACCCGGAGGACATCCAGCGGCCCCACGTCCCGGTCGGCCGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
49.854 |
92.703 |
0.462 |
| pilT | Pseudomonas stutzeri DSM 10701 |
48.688 |
92.703 |
0.451 |
| pilT | Acinetobacter nosocomialis M2 |
48.529 |
91.892 |
0.446 |
| pilT | Acinetobacter baumannii strain A118 |
48.235 |
91.892 |
0.443 |
| pilT | Acinetobacter baumannii D1279779 |
48.235 |
91.892 |
0.443 |
| pilT | Neisseria meningitidis 8013 |
48.503 |
90.27 |
0.438 |
| pilT | Acinetobacter baylyi ADP1 |
47.647 |
91.892 |
0.438 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
47.917 |
90.811 |
0.435 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
47.892 |
89.73 |
0.43 |
| pilT | Vibrio cholerae strain A1552 |
47.892 |
89.73 |
0.43 |
| pilT | Neisseria gonorrhoeae MS11 |
47.748 |
90 |
0.43 |
| pilT | Legionella pneumophila strain Lp02 |
47.59 |
89.73 |
0.427 |
| pilT | Legionella pneumophila strain ERS1305867 |
47.59 |
89.73 |
0.427 |
| pilU | Pseudomonas stutzeri DSM 10701 |
42.029 |
93.243 |
0.392 |
| pilU | Vibrio cholerae strain A1552 |
39.244 |
92.973 |
0.365 |