Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | MPF99_RS05615 | Genome accession | NZ_CP094130 |
| Coordinates | 1151560..1151964 (+) | Length | 134 a.a. |
| NCBI ID | WP_000599207.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe053 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1146560..1156964
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPF99_RS05580 (MPF99_05580) | - | 1146739..1147677 (-) | 939 | WP_245058460.1 | tetraacyldisaccharide 4'-kinase | - |
| MPF99_RS05585 (MPF99_05585) | - | 1147674..1148456 (-) | 783 | WP_199496577.1 | NAD+ synthase | - |
| MPF99_RS05595 (MPF99_05595) | ilvC | 1148704..1149696 (+) | 993 | WP_245059583.1 | ketol-acid reductoisomerase | - |
| MPF99_RS05600 (MPF99_05600) | minD | 1149715..1150521 (+) | 807 | WP_001019101.1 | septum site-determining protein MinD | - |
| MPF99_RS05605 (MPF99_05605) | minE | 1150518..1150751 (+) | 234 | WP_000051412.1 | cell division topological specificity factor MinE | - |
| MPF99_RS05610 (MPF99_05610) | dprA | 1150763..1151563 (+) | 801 | WP_245058462.1 | DNA-processing protein DprA | Machinery gene |
| MPF99_RS05615 (MPF99_05615) | dprB | 1151560..1151964 (+) | 405 | WP_000599207.1 | Holliday junction resolvase RuvX | Machinery gene |
| MPF99_RS05620 (MPF99_05620) | - | 1152091..1152669 (+) | 579 | WP_245058464.1 | tetratricopeptide repeat protein | - |
| MPF99_RS05625 (MPF99_05625) | - | 1152859..1153197 (+) | 339 | WP_000699911.1 | hypothetical protein | - |
| MPF99_RS05630 (MPF99_05630) | - | 1153181..1153741 (+) | 561 | WP_199498750.1 | hypothetical protein | - |
| MPF99_RS05635 (MPF99_05635) | - | 1153752..1154087 (+) | 336 | WP_245058466.1 | lysozyme | - |
| MPF99_RS05640 (MPF99_05640) | - | 1154038..1154430 (+) | 393 | WP_245058468.1 | hypothetical protein | - |
| MPF99_RS05645 (MPF99_05645) | - | 1154762..1155143 (+) | 382 | Protein_1104 | DUF1294 domain-containing protein | - |
| MPF99_RS05650 (MPF99_05650) | - | 1155143..1155928 (+) | 786 | WP_245058470.1 | hypothetical protein | - |
| MPF99_RS05655 (MPF99_05655) | - | 1155918..1156926 (+) | 1009 | Protein_1106 | hypothetical protein | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15326.85 Da Isoelectric Point: 8.7193
>NTDB_id=667293 MPF99_RS05615 WP_000599207.1 1151560..1151964(+) (dprB) [Helicobacter pylori strain Hpfe053]
MILACDVGLKRIGIAMLLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKDR
MILACDVGLKRIGIAMLLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKDR
Nucleotide
Download Length: 405 bp
>NTDB_id=667293 MPF99_RS05615 WP_000599207.1 1151560..1151964(+) (dprB) [Helicobacter pylori strain Hpfe053]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGGATCGCTATGCTTTTAAACGGCGTTATTTTACCTTTAGAAGC
GATTTTACGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGACACGAACGCGCGCATTGAGCATTTCATTAAGCTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGTGCTTGCAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTGAAAGATC
GCTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGGATCGCTATGCTTTTAAACGGCGTTATTTTACCTTTAGAAGC
GATTTTACGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGACACGAACGCGCGCATTGAGCATTTCATTAAGCTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGTGCTTGCAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTGAAAGATC
GCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
96.241 |
99.254 |
0.955 |