Detailed information
Bioinformatically predicted
Overview
| Name | comB3 | Type | Machinery gene |
| Locus tag | MPG85_RS07055 | Genome accession | NZ_CP094129 |
| Coordinates | 1468189..1468452 (-) | Length | 87 a.a. |
| NCBI ID | WP_000584971.1 | Uniprot ID | A0A0L0QIL1 |
| Organism | Helicobacter pylori strain Hpfe054 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1463189..1473452
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG85_RS07040 (MPG85_07040) | - | 1464162..1465592 (-) | 1431 | WP_180416419.1 | COG3014 family protein | - |
| MPG85_RS07050 (MPG85_07050) | comB4 | 1465824..1468187 (-) | 2364 | WP_245050553.1 | VirB4 family type IV secretion/conjugal transfer ATPase | Machinery gene |
| MPG85_RS07055 (MPG85_07055) | comB3 | 1468189..1468452 (-) | 264 | WP_000584971.1 | hypothetical protein | Machinery gene |
| MPG85_RS07060 (MPG85_07060) | comB2 | 1468452..1468733 (-) | 282 | WP_001272686.1 | TrbC/VirB2 family protein | Machinery gene |
| MPG85_RS07065 (MPG85_07065) | - | 1468878..1469705 (-) | 828 | WP_245050555.1 | DUF5718 family protein | - |
| MPG85_RS07070 (MPG85_07070) | - | 1469797..1470849 (-) | 1053 | WP_220943493.1 | MnmA/TRMU family protein | - |
| MPG85_RS07075 (MPG85_07075) | dnaG | 1470846..1472525 (-) | 1680 | WP_245050557.1 | DNA primase | - |
| MPG85_RS07080 (MPG85_07080) | groES | 1472799..1473155 (+) | 357 | WP_212778432.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 87 a.a. Molecular weight: 10076.17 Da Isoelectric Point: 9.5507
>NTDB_id=667270 MPG85_RS07055 WP_000584971.1 1468189..1468452(-) (comB3) [Helicobacter pylori strain Hpfe054]
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
Nucleotide
Download Length: 264 bp
>NTDB_id=667270 MPG85_RS07055 WP_000584971.1 1468189..1468452(-) (comB3) [Helicobacter pylori strain Hpfe054]
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATTTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGTAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATTTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGTAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB3 | Helicobacter pylori 26695 |
96.552 |
100 |
0.966 |