Detailed information NTG0667246

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: OG239_RS17075
• Genome accession: NZ_CP108814
• Coordinates: 3514482..3515153 (-)
• Length: 223 a.a.
• NCBI ID: WP_328925722.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00868
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3509482..3520153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG239_RS17055 (OG239_17085)	-	3510834..3511526 (+)	693	WP_405679949.1	hypothetical protein	-
OG239_RS17060 (OG239_17090)	-	3511633..3512544 (+)	912	WP_405679948.1	hypothetical protein	-
OG239_RS17065 (OG239_17095)	-	3512600..3512872 (-)	273	WP_328925720.1	hypothetical protein	-
OG239_RS17070 (OG239_17100)	clpX	3513042..3514328 (-)	1287	WP_328925721.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG239_RS17075 (OG239_17105)	clpP	3514482..3515153 (-)	672	WP_328925722.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG239_RS17080 (OG239_17110)	clpP	3515221..3515838 (-)	618	WP_328925723.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG239_RS17085 (OG239_17115)	tig	3516115..3517503 (-)	1389	WP_328925724.1	trigger factor	-
OG239_RS17100 (OG239_17130)	-	3518082..3519674 (-)	1593	WP_405679947.1	FAD-binding oxidoreductase	-
OG239_RS17105 (OG239_17135)	-	3519979..3520110 (-)	132	WP_328925726.1	hypothetical protein	-

Sequence

Protein

• Length: 223 a.a.
• Molecular weight: 24506.90 Da
• Isoelectric Point: 4.7847

>NTDB_id=667246 OG239_RS17075 WP_328925722.1 3514482..3515153(-) (clpP) [Streptomyces sp. NBC_00868]
MVNTQMHMNNLSPASGLYTGAQVDNRYVIPRFVERTSQGVREYDPYAKLFEERIIFLGVQIDDASANDVMAQLLCLESMD
PDRDISIYINSPGGSFTALTAIYDTMQFVKPDISTVCMGQAASAAAVLLAAGTPGKRMALPNARVLIHQPSGGTGREQLS
DLEIAANEILRMRDQLETMLAKHSTTPIEKIRDDIERDKILTAEDALAYGLIDQVVSTRKSSH

Nucleotide

• Length: 672 bp

>NTDB_id=667246 OG239_RS17075 WP_328925722.1 3514482..3515153(-) (clpP) [Streptomyces sp. NBC_00868]
ATGGTGAACACCCAGATGCACATGAACAACCTCTCTCCCGCGAGCGGCCTCTACACCGGCGCTCAGGTGGACAACCGCTA
CGTCATCCCGCGCTTCGTCGAGCGCACCTCGCAGGGCGTGCGCGAGTACGACCCGTACGCGAAGCTCTTCGAGGAGCGCA
TCATCTTCCTCGGCGTGCAGATCGACGACGCCTCCGCCAACGACGTCATGGCGCAGCTGCTGTGCCTGGAGTCGATGGAC
CCGGACCGCGACATCTCGATCTACATCAACAGCCCCGGTGGCTCCTTCACCGCGCTGACGGCGATCTACGACACGATGCA
GTTCGTGAAGCCGGACATCTCGACGGTCTGCATGGGCCAGGCGGCCTCCGCCGCCGCGGTCCTGCTCGCCGCCGGCACCC
CCGGCAAGCGCATGGCCCTGCCGAACGCCCGTGTGCTGATCCACCAGCCCTCCGGCGGCACCGGCCGTGAGCAGCTCTCC
GACCTGGAGATCGCGGCCAACGAGATCCTGCGCATGCGCGACCAGCTGGAGACCATGCTGGCCAAGCACTCGACGACGCC
GATCGAGAAGATCCGCGACGACATCGAGCGCGACAAGATTCTCACTGCGGAGGACGCTCTCGCGTACGGCCTGATCGACC
AGGTCGTTTCCACCCGCAAGAGCTCGCACTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (38-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	53.684	85.202	0.457
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	51.064	84.305	0.43
clpP	Streptococcus thermophilus LMD-9	45.876	86.996	0.399
clpP	Streptococcus pyogenes JRS4	45.876	86.996	0.399
clpP	Streptococcus pyogenes MGAS315	45.876	86.996	0.399
clpP	Streptococcus thermophilus LMG 18311	45.876	86.996	0.399
clpP	Streptococcus mutans UA159	46.316	85.202	0.395
clpP	Streptococcus pneumoniae Rx1	45.55	85.65	0.39
clpP	Streptococcus pneumoniae D39	45.55	85.65	0.39
clpP	Streptococcus pneumoniae TIGR4	45.55	85.65	0.39
clpP	Streptococcus pneumoniae R6	45.55	85.65	0.39
clpP	Lactococcus lactis subsp. cremoris KW2	45.026	85.65	0.386
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	43.979	85.65	0.377