Detailed information
Bioinformatically predicted
Overview
| Name | comB3 | Type | Machinery gene |
| Locus tag | MPG01_RS07135 | Genome accession | NZ_CP094124 |
| Coordinates | 1482329..1482592 (-) | Length | 87 a.a. |
| NCBI ID | WP_000584971.1 | Uniprot ID | A0A0L0QIL1 |
| Organism | Helicobacter pylori strain Hpfe057 | ||
| Function | transformation-associated type IV transport system (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1477329..1487592
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG01_RS07120 (MPG01_07120) | - | 1478303..1479733 (-) | 1431 | WP_245037601.1 | COG3014 family protein | - |
| MPG01_RS07130 (MPG01_07130) | comB4 | 1479964..1482327 (-) | 2364 | WP_245037602.1 | VirB4 family type IV secretion/conjugal transfer ATPase | Machinery gene |
| MPG01_RS07135 (MPG01_07135) | comB3 | 1482329..1482592 (-) | 264 | WP_000584971.1 | hypothetical protein | Machinery gene |
| MPG01_RS07140 (MPG01_07140) | comB2 | 1482592..1482873 (-) | 282 | WP_001272686.1 | TrbC/VirB2 family protein | Machinery gene |
| MPG01_RS07145 (MPG01_07145) | - | 1483018..1483845 (-) | 828 | WP_245037603.1 | DUF5718 family protein | - |
| MPG01_RS07150 (MPG01_07150) | - | 1484147..1485199 (-) | 1053 | WP_221009418.1 | MnmA/TRMU family protein | - |
| MPG01_RS07155 (MPG01_07155) | dnaG | 1485196..1486875 (-) | 1680 | WP_245037604.1 | DNA primase | - |
| MPG01_RS07160 (MPG01_07160) | groES | 1487150..1487506 (+) | 357 | WP_096481042.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 87 a.a. Molecular weight: 10076.17 Da Isoelectric Point: 9.5507
>NTDB_id=667206 MPG01_RS07135 WP_000584971.1 1482329..1482592(-) (comB3) [Helicobacter pylori strain Hpfe057]
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
MIILSASVKNLREISVKEKFLWLNAKSYLISVFVPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIARSKIKT
KTKCYRA
Nucleotide
Download Length: 264 bp
>NTDB_id=667206 MPG01_RS07135 WP_000584971.1 1482329..1482592(-) (comB3) [Helicobacter pylori strain Hpfe057]
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATCTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGTAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
ATGATTATCCTGTCAGCGAGCGTGAAGAATTTGCGTGAAATTTCGGTTAAAGAAAAATTTTTATGGCTGAACGCTAAGTC
TTATTTGATTTCTGTTTTTGTGCCTTTTATCTTGCTCCCTTGGATTGATTTGTTGAGCGCTTTTTTATTGTATTTAGGGT
TTTTAGCGCTCTTTAGCGTGCTGGAATTTTTTGATGAAGATATTGCAGATATTATTATTGCTAGAAGTAAAATAAAGACT
AAAACCAAATGTTATAGAGCGTAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB3 | Helicobacter pylori 26695 |
96.552 |
100 |
0.966 |