Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEC/comE3   Type   Machinery gene
Locus tag   MPG73_RS07155 Genome accession   NZ_CP094122
Coordinates   1481417..1482730 (-) Length   437 a.a.
NCBI ID   WP_245056963.1    Uniprot ID   -
Organism   Helicobacter pylori strain Hpfe058     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1476417..1487730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MPG73_RS07125 (MPG73_07125) nadC 1476880..1477701 (-) 822 WP_245056960.1 carboxylating nicotinate-nucleotide diphosphorylase -
  MPG73_RS07130 (MPG73_07130) nadA 1477701..1478711 (-) 1011 WP_245056961.1 quinolinate synthase NadA -
  MPG73_RS07135 (MPG73_07135) - 1478701..1479504 (-) 804 WP_245056962.1 phosphatidylserine decarboxylase -
  MPG73_RS07140 (MPG73_07140) - 1479501..1480004 (-) 504 WP_000953085.1 hypothetical protein -
  MPG73_RS07145 (MPG73_07145) - 1480017..1480511 (-) 495 WP_014537179.1 hypothetical protein -
  MPG73_RS07150 (MPG73_07150) mqnP 1480504..1481346 (-) 843 WP_231261077.1 menaquinone biosynthesis prenyltransferase MqnP -
  MPG73_RS07155 (MPG73_07155) comEC/comE3 1481417..1482730 (-) 1314 WP_245056963.1 ComEC/Rec2 family competence protein Machinery gene
  MPG73_RS07160 (MPG73_07160) - 1482727..1484193 (-) 1467 WP_245056964.1 replicative DNA helicase -
  MPG73_RS07165 (MPG73_07165) - 1484204..1485598 (-) 1395 WP_245056965.1 NAD(P)H-hydrate dehydratase -
  MPG73_RS07170 (MPG73_07170) crdS 1485601..1486803 (-) 1203 WP_245057909.1 copper-sensing histidine kinase CrdS -
  MPG73_RS07175 (MPG73_07175) crdR 1486769..1487410 (-) 642 WP_120843543.1 copper response regulator transcription factor CrdR -

Sequence

Protein


Download         Length: 437 a.a.        Molecular weight: 50054.97 Da        Isoelectric Point: 9.8315

>NTDB_id=667181 MPG73_RS07155 WP_245056963.1 1481417..1482730(-) (comEC/comE3) [Helicobacter pylori strain Hpfe058]
MKDKTFQGAFELLTTPKEYLLCGVILSLLLAINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYATIKEPLKNLQYRHAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHVRYFIDSTHSSALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQAFFKTSSFLARSFQVISLS
VLVFLNMLIIAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDSILNMPLTIPTISVFSPLWLLGVHLFLT
ILSARFFKVYLSMNVLSAGFFLYCCYQYIIMPSSIVG

Nucleotide


Download         Length: 1314 bp        

>NTDB_id=667181 MPG73_RS07155 WP_245056963.1 1481417..1482730(-) (comEC/comE3) [Helicobacter pylori strain Hpfe058]
TTGAAAGATAAAACTTTTCAGGGGGCGTTTGAACTTCTTACAACCCCCAAAGAATACTTGTTGTGTGGGGTTATTTTAAG
CCTTTTGTTGGCAATTAATCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCTACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAGGGCATGATC
TTTTATGCCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGCAAAATCAAACCTTGCTC
GTTTTTGGAGTCTCTAAAATCATGCTTTTTTCAAACTTATTCGTTTTCTTTAACGCGAAAACAAGATTTCAAATCGCATG
TGCGCTATTTCATTGACAGCACCCATTCAAGCGCTTTAGTGGGTAATTTGTATCGAGCGTTGTTTATAGGGGATAGCTTG
AATAAAGACTTAAGAGATAGGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTCCATTTAGGGATTTT
GAGTGCGAGCGTGTATTTCCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTACTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTGTTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCATG
CTGTATCGCTATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTTTTAAAACACACTCAAGCCTTTTTTAAAACCTCTTCTTTTTTGGCGCGATCTTTTCAAGTCATAAGCTTAAGC
GTGCTAGTGTTTTTGAACATGCTCATCATTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAACTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTTTTGCATGCTGTGGGTTTGGGGTCTTTGCTGGATAGCA
TTTTAAACATGCCTTTAACAATCCCTACGATTTCGGTTTTTTCGCCTTTGTGGCTTTTGGGGGTGCATTTATTTTTAACG
ATTTTGAGTGCGCGTTTTTTTAAAGTTTATTTAAGCATGAATGTTTTAAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTCAATTGTAGGTTAG

Domains

Predicted by InterproScan.

Competence protein (Competence)

(159-390)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/comE3 Helicobacter pylori 26695

94.966

100

0.95

Multiple sequence alignment