Detailed information NTG0667149

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: OG704_RS03590
• Genome accession: NZ_CP108812
• Coordinates: 874097..876736 (+)
• Length: 879 a.a.
• NCBI ID: WP_329022971.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00869
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 869097..881736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG704_RS03570 (OG704_03575)	dnaK	870228..872126 (+)	1899	WP_330451663.1	molecular chaperone DnaK	-
OG704_RS03575 (OG704_03580)	-	872134..872739 (+)	606	WP_329022966.1	nucleotide exchange factor GrpE	-
OG704_RS03580 (OG704_03585)	-	872746..873699 (+)	954	WP_329022968.1	J domain-containing protein	-
OG704_RS03585 (OG704_03590)	-	873696..874106 (+)	411	WP_329022970.1	chaperone modulator CbpM	-
OG704_RS03590 (OG704_03595)	clpC	874097..876736 (+)	2640	WP_329022971.1	ATP-dependent chaperone ClpB	Regulator
OG704_RS03595 (OG704_03600)	trxA	876733..877191 (+)	459	WP_326707069.1	thioredoxin	-
OG704_RS03600 (OG704_03605)	-	877264..877527 (+)	264	WP_329022975.1	UBP-type zinc finger domain-containing protein	-
OG704_RS03605 (OG704_03610)	-	877527..879287 (+)	1761	WP_329022977.1	FAD-dependent oxidoreductase	-

Sequence

Protein

• Length: 879 a.a.
• Molecular weight: 98011.92 Da
• Isoelectric Point: 4.9127

>NTDB_id=667149 OG704_RS03590 WP_329022971.1 874097..876736(+) (clpC) [Streptomyces sp. NBC_00869]
MDMNRLTQKSQEALQEAQSAAGRMGQTEVDGEHLLLALLDQENGLIPRLLPQTGTDPEELRAAVRGELSRRPKVTGPGAA
PGQVFVTQRLAGLLDAAEREAKRLKDEYVSVEHLLLALAEEGTSTAAGRLLNQAGITRDTFLGALTQVRGNQRVTSANPE
VAYEALEKYGRDLVAEAKEGRLDPVIGRDAEIRRVTQILSRKSKNNPVLIGDPGVGKTAIIEGLAQRIVRGDVPEGLSDK
IVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGGILLFVDELHTVVGAGAAEGAMDAGNMLKPMLARGELHMIGATT
LDEYRKHIEKDAALERRFQQVLVDEPSLEDAISILRGLRERLEVFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLVD
EACARLRTEIDSMPAELDEITRRVTRLEIEEAALSKETDPASRTRLEELRKELADLRGEADAKHAQWEAERQAIRRVQEL
RQEQEQVRQEAEEAERAYDLNRAAELRYGRLRDLERRLAAEEEQLATRQGQNRLLREVVTEEEIADIVAAWTGIPVARLQ
EGERDKLLRLDEILRERVVGQDEAVQLVADAIIRARSGIRDPRRPIGSFIFLGPTGVGKTELTKTLARALFDSEDNMVRL
DMSEYQERHTVSRLMGAPPGYVGYEEGGQLTEAVRRKPYSVVLFDEIEKAHSDVFNTLLQILDDGRITDAQGRTVNFRNT
VIIMTSNIGSEHLLDGATAEGEIKPDARALVMGELRGHFRPEFLNRVDDIVLFKPLGERQIERIVELQFDELRQRLAERR
IDVELTDAAREVISHQGYDPVYGARPLRRYISHEVETLVGRALLRGDVQDGATVRVDAEHGELVVTYDKPEEAREARAA

Nucleotide

• Length: 2640 bp

>NTDB_id=667149 OG704_RS03590 WP_329022971.1 874097..876736(+) (clpC) [Streptomyces sp. NBC_00869]
ATGGACATGAACCGCCTCACACAGAAATCCCAGGAAGCCCTCCAAGAGGCCCAGTCAGCGGCCGGCCGGATGGGGCAGAC
CGAAGTGGACGGCGAACACCTGCTGCTCGCACTCCTCGATCAGGAGAACGGTCTGATCCCACGGCTGCTACCGCAGACCG
GAACCGATCCGGAGGAACTGCGCGCGGCCGTGCGCGGGGAACTCTCCCGCCGCCCGAAGGTCACCGGCCCCGGTGCGGCA
CCCGGCCAGGTCTTCGTCACTCAGCGCCTCGCCGGCCTGCTAGACGCCGCGGAACGCGAGGCCAAACGCCTCAAGGACGA
GTACGTGTCCGTGGAGCACCTCCTGCTCGCCCTGGCTGAAGAGGGGACATCAACAGCCGCCGGACGCCTGCTCAACCAGG
CAGGGATCACGAGGGACACGTTCCTGGGCGCACTCACCCAGGTCCGCGGCAATCAGCGTGTCACGTCCGCCAATCCCGAG
GTGGCCTACGAAGCTCTGGAGAAGTACGGCCGCGATCTCGTCGCCGAGGCCAAGGAAGGCAGGCTCGACCCGGTCATCGG
CCGGGACGCCGAGATTCGCCGCGTCACCCAGATCCTGAGCCGCAAGTCCAAGAACAACCCGGTCCTCATCGGAGACCCCG
GCGTCGGCAAGACCGCCATCATCGAGGGCCTCGCCCAGCGCATCGTCCGCGGCGACGTGCCTGAGGGCCTTAGCGACAAG
ATCGTGTTCGCCCTCGACATGGGTTCTCTGGTCGCCGGTGCCAAATACCGAGGCGAGTTCGAGGAACGCCTCAAGGCCGT
GCTCAGCGAGGTCAAGGCTGCGCAAGGCGGCATCTTGCTCTTCGTCGACGAACTGCACACCGTTGTCGGTGCGGGCGCCG
CCGAAGGGGCCATGGACGCGGGGAACATGCTCAAGCCGATGCTTGCCCGCGGCGAACTCCACATGATCGGCGCCACCACC
CTCGACGAGTACCGCAAACACATCGAAAAGGACGCAGCGCTCGAACGACGATTCCAGCAGGTCCTGGTCGACGAGCCCAG
CCTTGAGGACGCCATCTCCATCCTGCGTGGACTGCGTGAGCGCTTGGAAGTCTTCCACGGCGTCAAGATCCAGGACACCG
CGCTGGTCTCCGCCGCCACCCTCAGCCACCGCTACATCACCGATCGATTCCTGCCCGACAAGGCCATCGACCTCGTCGAC
GAGGCATGCGCCCGGCTGCGTACCGAGATCGACTCCATGCCTGCCGAACTGGACGAGATCACCCGCCGCGTCACCCGTCT
GGAGATCGAGGAAGCAGCCCTCTCCAAGGAGACCGACCCCGCCAGCAGAACCCGCCTGGAGGAGCTGCGCAAGGAACTGG
CCGACCTGCGCGGTGAGGCCGACGCCAAACACGCTCAGTGGGAGGCCGAACGGCAGGCGATCCGGCGTGTGCAGGAACTG
CGCCAGGAACAGGAGCAGGTCCGCCAAGAGGCGGAGGAAGCCGAACGCGCCTACGACCTCAACCGCGCCGCCGAACTCCG
ATACGGCCGCCTCAGGGATTTGGAGCGCCGACTCGCAGCGGAGGAGGAGCAGCTGGCCACCAGGCAGGGGCAGAACCGGT
TGCTGCGCGAGGTGGTCACAGAGGAGGAGATCGCAGACATCGTCGCTGCCTGGACCGGCATCCCGGTCGCCCGCCTGCAG
GAAGGTGAACGCGACAAGCTGCTGCGCCTCGACGAGATTCTTCGCGAGCGCGTCGTCGGCCAGGACGAGGCCGTCCAGCT
CGTCGCCGACGCAATCATCCGAGCCCGCTCCGGCATCCGCGACCCTCGCCGCCCCATCGGTTCCTTCATCTTCCTCGGCC
CCACCGGCGTCGGAAAGACCGAGCTGACGAAGACCCTCGCCCGGGCGCTGTTCGACTCCGAGGACAACATGGTGCGCCTC
GACATGAGTGAGTACCAGGAGCGGCACACCGTCAGCAGGCTCATGGGCGCACCACCCGGATACGTCGGCTACGAAGAAGG
CGGCCAACTCACCGAGGCCGTACGCCGCAAGCCGTACTCGGTCGTGCTGTTCGACGAGATCGAGAAGGCACACAGCGACG
TCTTCAACACCCTGCTGCAGATCCTCGATGACGGCCGCATCACCGACGCCCAGGGCCGCACCGTCAACTTCCGCAACACC
GTGATCATCATGACGTCCAACATCGGCTCCGAGCACCTCCTCGACGGCGCCACCGCCGAGGGTGAGATCAAGCCTGACGC
CCGCGCGCTGGTGATGGGCGAGCTGCGCGGGCACTTCCGCCCGGAGTTCCTCAACCGCGTCGACGACATCGTGCTGTTCA
AGCCGCTGGGAGAGCGGCAGATCGAAAGGATCGTGGAGCTTCAGTTCGACGAACTGCGGCAGCGGCTGGCGGAACGCCGC
ATCGACGTAGAACTCACCGATGCGGCGCGAGAGGTGATTTCCCACCAGGGCTACGACCCGGTGTACGGGGCCAGGCCGCT
GCGGCGGTACATCTCCCACGAGGTGGAGACGCTGGTCGGACGTGCCCTTCTGCGTGGTGACGTCCAGGACGGCGCGACCG
TCCGTGTCGACGCCGAACACGGAGAGCTGGTGGTCACCTACGACAAGCCGGAAGAGGCCCGGGAGGCGAGGGCAGCGTGA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (776-856)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-64)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-150)

• ATPase family associated with various cellular activities (AAA) (AAA) (208-340)

• AAA domain (Cdc48 subfamily) (AAA_2) (604-770)

• AAA lid domain (AAA_lid_9) (347-449)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.086	99.545	0.469
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	41.581	99.317	0.413
clpC	Lactococcus lactis subsp. cremoris KW2	46.331	79.067	0.366