Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | MPG78_RS02705 | Genome accession | NZ_CP094119 |
| Coordinates | 547031..547435 (+) | Length | 134 a.a. |
| NCBI ID | WP_075645903.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe064 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 542031..552435
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG78_RS02670 (MPG78_02670) | - | 542214..543152 (-) | 939 | WP_180518504.1 | tetraacyldisaccharide 4'-kinase | - |
| MPG78_RS02675 (MPG78_02675) | - | 543149..543931 (-) | 783 | WP_245040774.1 | NAD+ synthase | - |
| MPG78_RS02685 (MPG78_02685) | ilvC | 544180..545172 (+) | 993 | WP_245040776.1 | ketol-acid reductoisomerase | - |
| MPG78_RS02690 (MPG78_02690) | minD | 545191..545997 (+) | 807 | WP_245040778.1 | septum site-determining protein MinD | - |
| MPG78_RS02695 (MPG78_02695) | minE | 545994..546227 (+) | 234 | WP_000051414.1 | cell division topological specificity factor MinE | - |
| MPG78_RS02700 (MPG78_02700) | dprA | 546234..547034 (+) | 801 | WP_245040780.1 | DNA-processing protein DprA | Machinery gene |
| MPG78_RS02705 (MPG78_02705) | dprB | 547031..547435 (+) | 405 | WP_075645903.1 | Holliday junction resolvase RuvX | Machinery gene |
| MPG78_RS02710 (MPG78_02710) | - | 547728..547931 (+) | 204 | WP_245040782.1 | sel1 repeat family protein | - |
| MPG78_RS02715 (MPG78_02715) | - | 548119..548457 (+) | 339 | WP_245040785.1 | hypothetical protein | - |
| MPG78_RS02720 (MPG78_02720) | - | 548441..549001 (+) | 561 | WP_245040786.1 | hypothetical protein | - |
| MPG78_RS02725 (MPG78_02725) | - | 549012..549461 (+) | 450 | WP_245040788.1 | glycoside hydrolase family protein | - |
| MPG78_RS02730 (MPG78_02730) | - | 549526..549687 (+) | 162 | WP_240446564.1 | lysozyme | - |
| MPG78_RS02735 (MPG78_02735) | - | 550011..550392 (+) | 382 | Protein_536 | DUF1294 domain-containing protein | - |
| MPG78_RS02740 (MPG78_02740) | - | 550392..551177 (+) | 786 | WP_245040790.1 | hypothetical protein | - |
| MPG78_RS02745 (MPG78_02745) | - | 551167..552261 (+) | 1095 | WP_245040791.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15279.82 Da Isoelectric Point: 9.5494
>NTDB_id=667114 MPG78_RS02705 WP_075645903.1 547031..547435(+) (dprB) [Helicobacter pylori strain Hpfe064]
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKKR
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKKR
Nucleotide
Download Length: 405 bp
>NTDB_id=667114 MPG78_RS02705 WP_075645903.1 547031..547435(+) (dprB) [Helicobacter pylori strain Hpfe064]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGGATCGCTGCACTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGAGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGACACGAACGCGCGCATTGAACATTTCATCAAGCTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGAGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGTAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTAAAAAAGC
GCTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGGATCGCTGCACTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGAGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGACACGAACGCGCGCATTGAACATTTCATCAAGCTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGAGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGTAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTAAAAAAGC
GCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
97.727 |
98.507 |
0.963 |