Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | MPG07_RS00265 | Genome accession | NZ_CP094116 |
| Coordinates | 60666..61241 (+) | Length | 191 a.a. |
| NCBI ID | WP_245045735.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain Hpfe066 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 55666..66241
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MPG07_RS00240 (MPG07_00240) | uvrD | 56355..58400 (+) | 2046 | WP_245045725.1 | DNA helicase UvrD | - |
| MPG07_RS00245 (MPG07_00245) | flgA | 58397..59053 (+) | 657 | WP_245045727.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| MPG07_RS00250 (MPG07_00250) | - | 59063..59626 (+) | 564 | WP_000780124.1 | UbiX family flavin prenyltransferase | - |
| MPG07_RS00255 (MPG07_00255) | coaD | 59626..60099 (+) | 474 | WP_001169260.1 | pantetheine-phosphate adenylyltransferase | - |
| MPG07_RS00260 (MPG07_00260) | tmk | 60103..60678 (+) | 576 | WP_245045733.1 | dTMP kinase | - |
| MPG07_RS00265 (MPG07_00265) | comFC | 60666..61241 (+) | 576 | WP_245045735.1 | ComF family protein | Machinery gene |
| MPG07_RS00270 (MPG07_00270) | - | 61274..63304 (+) | 2031 | WP_245045736.1 | N-6 DNA methylase | - |
| MPG07_RS00275 (MPG07_00275) | - | 63301..64575 (+) | 1275 | WP_245045738.1 | restriction endonuclease subunit S | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21381.97 Da Isoelectric Point: 9.2848
>NTDB_id=667064 MPG07_RS00265 WP_245045735.1 60666..61241(+) (comFC) [Helicobacter pylori strain Hpfe066]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRATNTISYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSTDE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRATNTISYAGKSLEFRANNPRDFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSTDE
Nucleotide
Download Length: 576 bp
>NTDB_id=667064 MPG07_RS00265 WP_245045735.1 60666..61241(+) (comFC) [Helicobacter pylori strain Hpfe066]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCCCACTTTGCAATCGCTCTTTG
CAGCACGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAACTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGCGCGGAATTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGGATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGACATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCCCACTTTGCAATCGCTCTTTG
CAGCACGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
93.717 |
100 |
0.937 |