Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG214_RS16885 Genome accession   NZ_CP108806
Coordinates   3954642..3955766 (+) Length   374 a.a.
NCBI ID   WP_093598779.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00872     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3949642..3960766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG214_RS16870 (OG214_16885) - 3949917..3950795 (+) 879 WP_363082986.1 hypothetical protein -
  OG214_RS16875 (OG214_16890) - 3950945..3952960 (-) 2016 WP_405987529.1 RNA polymerase sigma factor -
  OG214_RS16880 (OG214_16895) radA/sms 3953185..3954597 (+) 1413 WP_363082993.1 DNA repair protein RadA Machinery gene
  OG214_RS16885 (OG214_16900) disA 3954642..3955766 (+) 1125 WP_093598779.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG214_RS16890 (OG214_16905) - 3955995..3956924 (-) 930 WP_405985182.1 hypothetical protein -
  OG214_RS16895 (OG214_16910) - 3957122..3957889 (+) 768 WP_405985183.1 phosphatase PAP2 family protein -
  OG214_RS16900 (OG214_16915) - 3958011..3959075 (+) 1065 WP_405985184.1 A/G-specific adenine glycosylase -
  OG214_RS16905 (OG214_16920) - 3959316..3959981 (+) 666 WP_405985185.1 SigE family RNA polymerase sigma factor -
  OG214_RS16910 (OG214_16925) - 3960032..3960637 (+) 606 WP_405987530.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40162.96 Da        Isoelectric Point: 5.0196

>NTDB_id=667040 OG214_RS16885 WP_093598779.1 3954642..3955766(+) (disA) [Streptomyces sp. NBC_00872]
MAANDRASAPGKSGAGSGNEALMRASLSAVAPGTALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPESSIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERDLVARDYVPEPTAKRARTVDEALGELDSLSHSELLELPTVARALGYSGAPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVGDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=667040 OG214_RS16885 WP_093598779.1 3954642..3955766(+) (disA) [Streptomyces sp. NBC_00872]
GTGGCAGCCAACGACCGGGCATCAGCGCCCGGAAAGTCCGGCGCGGGCTCCGGCAACGAAGCGCTGATGCGCGCCTCCCT
GAGCGCGGTCGCGCCGGGCACGGCCCTGCGCGACGGGCTGGAGCGGATCCTGCGCGGAAACACCGGCGGTCTCATCGTCC
TGGGCATGGACAAGACCGTCGAATCGATGTGTACCGGCGGGTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTCATCCTCGACAAGGACATCACCAAGATTCTGCGGGCCGGCGTCCAGTTGGTCCC
CGAGTCCTCCATCCCCACGGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTGTCCAAGCAGTGCGGCTTCCCCG
TCGTCTCCGTATCGCAGTCGATGCGCCTGATCGCCCTGTATGTGAACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGGGCGAACCAGGCGCTGGCGACCCTGGAGCGGTACAAGCTCCGTCTCGACGAGGTGGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTGGCCCAGCGGCTGGAGATGGTGCGCCGGATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTTCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGTGTGGAGCCGGAGCGGGATCTGGTCGCGCGCGACTATGTGCCCGAGCCGACGGCGAAGCGGGCCCGTACGGTCGACGA
GGCGCTCGGCGAGCTGGACTCGCTGAGCCACTCGGAGCTGCTGGAACTGCCCACCGTGGCAAGGGCGCTGGGCTACAGCG
GGGCGCCCGAGACGCTCGACTCCGCGGTCTCGCCGCGTGGTTACCGGCTGCTGGCCAAGGTGCCGCGGCTGCCTGGGGCC
ATCATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTCCAGAAGCTGCTGGCGGCGAGCGTGGGCGATCTCCAGACGGTGGA
CGGTGTCGGCGAGGCGCGGGCACGCAGCGTCCGTGAGGGCCTGTCGCGGCTCGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438


Multiple sequence alignment