Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   OH809_RS30765 Genome accession   NZ_CP108803
Coordinates   6665693..6666769 (-) Length   358 a.a.
NCBI ID   WP_406418747.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00873     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 6660693..6671769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH809_RS30745 (OH809_30785) cobT 6661868..6662950 (-) 1083 WP_406418753.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase -
  OH809_RS30750 (OH809_30790) - 6663232..6664059 (-) 828 WP_406418751.1 class I SAM-dependent methyltransferase -
  OH809_RS30755 (OH809_30795) - 6664100..6665302 (-) 1203 WP_406418749.1 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase -
  OH809_RS30760 (OH809_30800) - 6665414..6665623 (+) 210 WP_030933634.1 hypothetical protein -
  OH809_RS30765 (OH809_30805) htrA 6665693..6666769 (-) 1077 WP_406418747.1 S1C family serine protease Regulator
  OH809_RS30770 (OH809_30810) - 6666936..6667670 (-) 735 WP_406516300.1 class I SAM-dependent methyltransferase -
  OH809_RS30775 (OH809_30815) - 6667796..6668395 (-) 600 WP_327246829.1 DUF3043 domain-containing protein -
  OH809_RS30780 (OH809_30820) - 6668692..6669474 (+) 783 WP_366134536.1 PspA/IM30 family protein -
  OH809_RS30785 (OH809_30825) pspAA 6669485..6669763 (+) 279 WP_037694004.1 PspA-associated protein PspAA -
  OH809_RS30790 (OH809_30830) - 6669914..6671182 (+) 1269 WP_406418744.1 sensor histidine kinase -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 36253.16 Da        Isoelectric Point: 5.7877

>NTDB_id=666990 OH809_RS30765 WP_406418747.1 6665693..6666769(-) (htrA) [Streptomyces sp. NBC_00873]
MDASRSRGRLYRLLLPLTAGVCAIALVSGCSDSDSASADATKSASPHATSQAAGDLQAEYEAVIKNVLPSVVQIQAGNSL
GSGVVYDKKGHIVTNAHVVGQEKTFNVTVATGEKVLGASLVATYPEQDLAVIKLDNVPSGLKAAKFGNSDKVEVGQIVLA
MGSPLGLSSSVTQGIVSAVGRTVSESQTEGGIGATIANMVQTSAAINPGNSGGALVNLNSEVIGIPTLAATDPQMNGAAP
GIGFAIPVSMVKTVADQIIKSGKVTDSGRAALNITGRAVVDDNYQPFGIAVVAVTAGGAADKAGLRVGDIVTKIGDTRVT
TMTELAETLANDKPGQKVKVTYLRDGVERTSVVTLGEI

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=666990 OH809_RS30765 WP_406418747.1 6665693..6666769(-) (htrA) [Streptomyces sp. NBC_00873]
ATGGATGCTTCCCGCTCGCGCGGCCGTCTGTACCGGCTGCTGCTGCCTCTGACCGCAGGTGTCTGTGCCATAGCCCTGGT
GTCCGGCTGCTCGGACTCGGACTCGGCCAGCGCCGATGCCACGAAGTCGGCCTCGCCGCATGCGACTTCCCAGGCCGCAG
GTGACCTGCAGGCCGAGTACGAGGCCGTCATAAAAAACGTGCTGCCCTCCGTCGTACAGATCCAAGCCGGCAACAGTCTC
GGATCCGGCGTCGTCTACGACAAGAAGGGCCATATCGTCACCAATGCCCATGTGGTCGGCCAGGAGAAGACGTTCAACGT
CACCGTCGCCACCGGCGAGAAGGTGCTGGGCGCCTCGCTGGTCGCCACCTATCCGGAGCAGGACCTGGCCGTCATCAAGC
TCGACAACGTACCGAGCGGGCTGAAGGCGGCGAAGTTCGGCAACTCGGACAAGGTCGAGGTCGGCCAGATAGTGCTGGCG
ATGGGTTCGCCGCTCGGACTGTCCAGCAGCGTCACCCAGGGCATCGTGTCGGCGGTCGGCCGGACCGTCAGCGAGAGTCA
GACGGAGGGTGGCATCGGGGCGACCATTGCGAACATGGTGCAGACCTCGGCGGCGATCAACCCGGGCAACAGCGGCGGTG
CGCTGGTGAACCTGAACAGTGAGGTGATCGGCATTCCGACGCTGGCGGCGACGGATCCGCAGATGAACGGCGCGGCACCG
GGCATAGGGTTCGCGATCCCCGTCTCGATGGTGAAGACGGTGGCCGACCAGATCATCAAGAGCGGCAAGGTCACCGACTC
GGGCCGGGCGGCGCTGAACATCACCGGCCGCGCGGTCGTCGACGACAACTACCAGCCGTTCGGAATCGCGGTGGTCGCCG
TCACGGCGGGCGGCGCCGCGGACAAGGCCGGACTGCGGGTCGGCGACATCGTCACGAAGATCGGCGACACACGGGTCACG
ACGATGACGGAGCTGGCCGAGACGCTGGCCAACGACAAGCCGGGCCAGAAGGTCAAGGTGACATATCTGCGCGACGGTGT
GGAGAGGACGTCGGTCGTCACGCTGGGCGAGATCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

34.635

100

0.372