Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OH809_RS12075 Genome accession   NZ_CP108803
Coordinates   2692552..2693346 (+) Length   264 a.a.
NCBI ID   WP_266980763.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00873     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2687552..2698346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH809_RS12060 (OH809_12085) - 2687787..2688323 (+) 537 WP_406422389.1 TerD family protein -
  OH809_RS12065 (OH809_12090) - 2688422..2691325 (-) 2904 WP_406422388.1 vitamin B12-dependent ribonucleotide reductase -
  OH809_RS12070 (OH809_12095) nrdR 2691487..2691999 (-) 513 WP_406422387.1 transcriptional regulator NrdR -
  OH809_RS12075 (OH809_12100) dinR/lexA 2692552..2693346 (+) 795 WP_266980763.1 transcriptional repressor LexA Regulator
  OH809_RS12080 (OH809_12105) - 2693464..2695434 (-) 1971 WP_406422386.1 ATP-dependent DNA helicase -
  OH809_RS12085 (OH809_12110) - 2695699..2696898 (+) 1200 WP_406422385.1 IS110 family transposase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 28609.35 Da        Isoelectric Point: 7.4239

>NTDB_id=666945 OH809_RS12075 WP_266980763.1 2692552..2693346(+) (dinR/lexA) [Streptomyces sp. NBC_00873]
MTTTADSATITAQDRSQSRLQPVHAMNDSVTNTEGPEPARPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYP
PSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILAE
ESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHN
SAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=666945 OH809_RS12075 WP_266980763.1 2692552..2693346(+) (dinR/lexA) [Streptomyces sp. NBC_00873]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGAGCCGACTCCAGCCGGTGCATGCCATGAA
TGACTCAGTCACGAACACGGAGGGGCCAGAGCCGGCACGACCGGCGCGCTCGCTCCCCGGCCGACCTCCAGGCATCCGAG
CGGACAGCTCGGGGCTCACGGACCGCCAACGGCGCGTGATCGAGGTCATCCGGGATTCCGTGCAACGCCGGGGATACCCG
CCGTCGATGCGGGAGATCGGTCAGGCGGTGGGCCTGTCCAGCACGTCCTCCGTCGCCCATCAGCTGATGGCCCTTGAGCG
CAAGGGCTTCCTGCGCCGCGACCCGCACCGTCCCCGGGCGTACGAGGTCCGTGGTTCGGATCAGCCCAGTACGCAGCCGA
CCGATACGACCGGCAAGCCCGCGGCATCGTACGTACCGCTCGTCGGGCGGATCGCAGCCGGTGGCCCGATCCTCGCCGAG
GAATCGGTCGAGGACGTCTTTCCGCTCCCCCGCCAGCTGGTCGGGGACGGCGAGCTGTTCGTTCTGAAGGTCGTCGGCGA
CTCGATGATCGAGGCGGCGATCTGTGACGGCGACTGGGTCACCGTCCGCCGTCAGCCCGTAGCGGAGAACGGCGACATCG
TGGCCGCGATGCTGGACGGCGAAGCCACCGTCAAGCGCTTCAAGCGGGAGGACGGCCATGTATGGCTGCTCCCGCACAAC
TCCGCGTACCAGCCGATCCCTGGCGACGAGGCAACCATCCTCGGCAAGGTCGTGGCGGTGCTGCGGCGAGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(146-258)

LexA DNA binding domain (LexA_DNA_bind)

(57-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80.303

0.371